HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.4 nTPM
HPA Brain:153.3 nTPM
GTEx:23.4 nTPM
FANTOM5:111.0 Scaled Tags Per Million
Pig:36.5 nTPM
Mouse:61.2 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 153.3
Sample id Sample description nTPM
Hippocampus
nTPM: 120.1
2148 Female, age 91, left hemisphere 177.6
2621 Female, age 67, right hemisphere 138.6
1911 Female, age 85, right hemisphere 113.0
1855 Male, age 76, left hemisphere 103.7
1898 Male, age 80, left hemisphere 94.3
2529 Female, age 94, left hemisphere 93.6
Dentate gyrus
nTPM: 125.5
1927 Female, age 91, both hemispheres 186.9
2531 Female, age 67, both hemispheres 169.7
2246 Female, age 85, both hemispheres 120.8
2528 Male, age 74, both hemispheres 113.7
2010 Male, age 76, both hemispheres 85.8
2530 Female, age 94, left hemisphere 76.4
Entorhinal gyrus
nTPM: 132.5
2613 Female, age 94, left hemisphere 172.9
2686 Male, age 75, right hemisphere 159.5
1938 Female, age 85, left hemisphere 130.4
1787 Male, age 76, left hemisphere 128.8
2764 Male, age 80, right hemisphere 117.0
2117 Female, age 91, right hemisphere 86.4
Hippocampus, CA1
nTPM: 133.3
2749 Male, age 80, left hemisphere 183.0
2527 Male, age 74, both hemispheres 153.2
2045 Male, age 76, both hemispheres 111.4
2082 Female, age 91, right hemisphere 109.5
1873 Female, age 85, both hemispheres 109.3
Hippocampus, CA2
nTPM: 111.6
1892 Male, age 76, both hemispheres 132.9
2249 Male, age 74, both hemispheres 115.5
2113 Female, age 91, right hemisphere 113.9
2437 Female, age 94, left hemisphere 113.4
1963 Male, age 80, left hemisphere 108.7
1940 Female, age 85, left hemisphere 84.9
Hippocampus, CA3
nTPM: 153.3
2620 Female, age 94, left hemisphere 219.7
2137 Male, age 80, left hemisphere 217.7
2861 Female, age 67, both hemispheres 168.0
2436 Male, age 74, both hemispheres 114.4
1867 Male, age 76, both hemispheres 109.0
1891 Female, age 85, both hemispheres 91.3
Parahippocampal cortex
nTPM: 136.8
2693 Female, age 94, both hemispheres 185.1
2245 Female, age 91, both hemispheres 180.1
2622 Female, age 67, right hemisphere 154.8
1990 Female, age 91, right hemisphere 142.5
2250 Female, age 67, right hemisphere 135.2
2532 Female, age 72, left hemisphere 124.0
2692 Male, age 74, both hemispheres 116.5
1933 Female, age 85, both hemispheres 116.3
1850 Male, age 80, both hemispheres 113.7
2018 Male, age 76, both hemispheres 99.7
Perirhinal gyrus
nTPM: 137.8
1847 Female, age 91, left hemisphere 156.0
2521 Female, age 94, right hemisphere 155.2
2848 Male, age 76, right hemisphere 133.3
1841 Female, age 85, right hemisphere 123.0
1794 Male, age 80, right hemisphere 121.3
Subiculum
nTPM: 103.7
1901 Male, age 80, both hemispheres 119.3
2619 Male, age 74, both hemispheres 113.3
1977 Female, age 85, both hemispheres 112.6
2729 Female, age 91, right hemisphere 104.0
2438 Female, age 94, left hemisphere 98.3
2042 Male, age 76, both hemispheres 74.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 59.8
Min nTPM: 0.3
Std nTPM: 14.9
Median nTPM: 22.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 59.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 57.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 57.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 56.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 54.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 53.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 53.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 52.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 51.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 51.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 48.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.0
FF:10169-103B7 60 years, female 142.2
FF:10153-102I9 76 years, female 79.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.5
Pig sample Sample description nTPM
Subiculum
nTPM: 30.8
Samples: 4

Max nTPM: 44.2
Min nTPM: 22.4
Sample A Female 44.2
Sample B Female 28.1
Sample C Male 28.6
Sample D Male 22.4
Dorsal hippocampus
nTPM: 32.4
Samples: 4

Max nTPM: 38.5
Min nTPM: 24.0
Sample A Female 31.7
Sample B Female 38.5
Sample C Male 24.0
Sample D Male 35.2
Entorhinal cortex
nTPM: 36.5
Samples: 4

Max nTPM: 38.2
Min nTPM: 35.0
Sample A Female 35.0
Sample B Female 37.1
Sample C Male 35.8
Sample D Male 38.2
Ventral hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 36.9
Min nTPM: 20.5
Sample A Female 20.5
Sample B Female 26.8
Sample C Male 30.6
Sample D Male 36.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.2
Samples: 4

Max nTPM: 71.9
Min nTPM: 53.0
Sample A Male 62.6
Sample B Male 57.2
Sample C Female 53.0
Sample D Female 71.9
Hippocampal formation
nTPM: 60.9
Samples: 4

Max nTPM: 70.5
Min nTPM: 52.1
Sample A Male 52.9
Sample B Male 68.1
Sample C Female 70.5
Sample D Female 52.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
69289459 Antisense, RP_050407_03_C06, Mouse strain C57BL/6J (56 days, male) 13.5
71735078 Antisense, RP_050719_04_G10, Mouse strain C57BL/6J (56 days, male) 0.0

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