HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:2.8 nTPM
HPA Brain:18.9 nTPM
GTEx:2.8 nTPM
FANTOM5:9.0 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:1.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB075701
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.9
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
2529 Female, age 94, left hemisphere 22.3
2148 Female, age 91, left hemisphere 19.8
1911 Female, age 85, right hemisphere 19.2
1855 Male, age 76, left hemisphere 17.7
2621 Female, age 67, right hemisphere 17.5
1898 Male, age 80, left hemisphere 17.2
Dentate gyrus
nTPM: 17.0
2528 Male, age 74, both hemispheres 21.2
2530 Female, age 94, left hemisphere 18.6
2246 Female, age 85, both hemispheres 18.4
2010 Male, age 76, both hemispheres 16.3
1927 Female, age 91, both hemispheres 13.8
2531 Female, age 67, both hemispheres 13.5
Entorhinal gyrus
nTPM: 15.2
2117 Female, age 91, right hemisphere 20.7
2686 Male, age 75, right hemisphere 17.4
1938 Female, age 85, left hemisphere 15.7
2764 Male, age 80, right hemisphere 14.2
1787 Male, age 76, left hemisphere 11.8
2613 Female, age 94, left hemisphere 11.6
Hippocampus, CA1
nTPM: 17.3
2527 Male, age 74, both hemispheres 21.4
1873 Female, age 85, both hemispheres 20.3
2082 Female, age 91, right hemisphere 17.9
2045 Male, age 76, both hemispheres 15.5
2749 Male, age 80, left hemisphere 11.4
Hippocampus, CA2
nTPM: 17.1
2249 Male, age 74, both hemispheres 20.6
2113 Female, age 91, right hemisphere 20.2
1963 Male, age 80, left hemisphere 18.7
1940 Female, age 85, left hemisphere 17.8
2437 Female, age 94, left hemisphere 15.4
1892 Male, age 76, both hemispheres 9.8
Hippocampus, CA3
nTPM: 16.7
2436 Male, age 74, both hemispheres 25.6
1891 Female, age 85, both hemispheres 19.6
2861 Female, age 67, both hemispheres 17.5
2620 Female, age 94, left hemisphere 16.0
1867 Male, age 76, both hemispheres 11.7
2137 Male, age 80, left hemisphere 10.1
Parahippocampal cortex
nTPM: 14.8
2692 Male, age 74, both hemispheres 20.0
2622 Female, age 67, right hemisphere 16.3
2250 Female, age 67, right hemisphere 15.7
1933 Female, age 85, both hemispheres 15.3
2245 Female, age 91, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.4
2018 Male, age 76, both hemispheres 14.2
1850 Male, age 80, both hemispheres 13.5
2693 Female, age 94, both hemispheres 12.4
2532 Female, age 72, left hemisphere 11.9
Perirhinal gyrus
nTPM: 11.7
1847 Female, age 91, left hemisphere 13.7
1841 Female, age 85, right hemisphere 12.0
2521 Female, age 94, right hemisphere 11.9
1794 Male, age 80, right hemisphere 11.6
2848 Male, age 76, right hemisphere 9.4
Subiculum
nTPM: 18.6
2619 Male, age 74, both hemispheres 22.3
2729 Female, age 91, right hemisphere 22.3
2438 Female, age 94, left hemisphere 20.3
2042 Male, age 76, both hemispheres 16.2
1901 Male, age 80, both hemispheres 15.9
1977 Female, age 85, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.8
Samples: 197

Max nTPM: 7.4
Min nTPM: 0.0
Std nTPM: 1.4
Median nTPM: 2.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 7.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 7.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 6.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 6.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 6.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 5.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 5.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 5.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 5.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 5.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 5.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.0
FF:10169-103B7 60 years, female 9.3
FF:10153-102I9 76 years, female 8.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 11.7
Min nTPM: 9.8
Sample A Female 9.8
Sample B Female 11.0
Sample C Male 11.7
Sample D Male 11.6
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 10.4
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 9.1
Sample C Male 8.6
Sample D Male 10.4
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 11.0
Min nTPM: 9.0
Sample A Female 9.8
Sample B Female 9.0
Sample C Male 9.8
Sample D Male 11.0
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.5
Sample A Female 9.5
Sample B Female 10.8
Sample C Male 11.8
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.9
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.8
Sample A Male 1.8
Sample B Male 1.9
Sample C Female 2.0
Sample D Female 2.0
Hippocampal formation
nTPM: 1.4
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.1
Sample A Male 1.7
Sample B Male 1.3
Sample C Female 1.1
Sample D Female 1.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
77454629 Antisense, RP_070129_01_A12, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org