HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:23.1 nTPM
HPA Brain:90.6 nTPM
GTEx:23.1 nTPM
FANTOM5:70.6 Scaled Tags Per Million
Pig:77.6 nTPM
Mouse:52.8 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019635Antibody HPA019691Antibody HPA022119
Glial cells Not detectedLowNot detected
Neuronal cells Not detectedMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.6
Sample id Sample description nTPM
Hippocampus
nTPM: 76.8
2529 Female, age 94, left hemisphere 96.0
1911 Female, age 85, right hemisphere 82.4
2148 Female, age 91, left hemisphere 74.2
2621 Female, age 67, right hemisphere 73.7
1855 Male, age 76, left hemisphere 67.7
1898 Male, age 80, left hemisphere 67.0
Dentate gyrus
nTPM: 72.6
2530 Female, age 94, left hemisphere 91.3
2528 Male, age 74, both hemispheres 78.7
2010 Male, age 76, both hemispheres 78.4
2246 Female, age 85, both hemispheres 72.4
2531 Female, age 67, both hemispheres 64.2
1927 Female, age 91, both hemispheres 50.5
Entorhinal gyrus
nTPM: 80.4
2117 Female, age 91, right hemisphere 110.9
2686 Male, age 75, right hemisphere 87.8
2764 Male, age 80, right hemisphere 80.4
1787 Male, age 76, left hemisphere 70.5
1938 Female, age 85, left hemisphere 68.2
2613 Female, age 94, left hemisphere 64.4
Hippocampus, CA1
nTPM: 65.3
2527 Male, age 74, both hemispheres 81.9
2082 Female, age 91, right hemisphere 72.4
1873 Female, age 85, both hemispheres 72.1
2045 Male, age 76, both hemispheres 53.2
2749 Male, age 80, left hemisphere 46.9
Hippocampus, CA2
nTPM: 68.6
2113 Female, age 91, right hemisphere 78.2
1963 Male, age 80, left hemisphere 73.5
2437 Female, age 94, left hemisphere 72.4
2249 Male, age 74, both hemispheres 72.3
1940 Female, age 85, left hemisphere 71.3
1892 Male, age 76, both hemispheres 43.7
Hippocampus, CA3
nTPM: 62.5
1891 Female, age 85, both hemispheres 95.2
1867 Male, age 76, both hemispheres 61.6
2620 Female, age 94, left hemisphere 61.2
2861 Female, age 67, both hemispheres 57.4
2436 Male, age 74, both hemispheres 54.5
2137 Male, age 80, left hemisphere 45.3
Parahippocampal cortex
nTPM: 74.1
2692 Male, age 74, both hemispheres 106.1
2532 Female, age 72, left hemisphere 85.7
1990 Female, age 91, right hemisphere 80.3
2018 Male, age 76, both hemispheres 72.3
1850 Male, age 80, both hemispheres 71.2
2622 Female, age 67, right hemisphere 70.5
2245 Female, age 91, both hemispheres 69.5
1933 Female, age 85, both hemispheres 64.2
2693 Female, age 94, both hemispheres 62.9
2250 Female, age 67, right hemisphere 58.2
Perirhinal gyrus
nTPM: 57.6
1794 Male, age 80, right hemisphere 60.9
2521 Female, age 94, right hemisphere 60.8
2848 Male, age 76, right hemisphere 59.3
1847 Female, age 91, left hemisphere 55.4
1841 Female, age 85, right hemisphere 51.6
Subiculum
nTPM: 90.6
2438 Female, age 94, left hemisphere 99.2
2042 Male, age 76, both hemispheres 98.8
2619 Male, age 74, both hemispheres 95.2
1901 Male, age 80, both hemispheres 89.4
2729 Female, age 91, right hemisphere 82.1
1977 Female, age 85, both hemispheres 78.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 66.6
Min nTPM: 5.6
Std nTPM: 9.7
Median nTPM: 21.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 66.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 55.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 52.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 51.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 43.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 42.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 41.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 40.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 39.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.6
FF:10153-102I9 76 years, female 84.2
FF:10169-103B7 60 years, female 57.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.6
Pig sample Sample description nTPM
Subiculum
nTPM: 69.5
Samples: 4

Max nTPM: 71.8
Min nTPM: 66.6
Sample A Female 66.6
Sample B Female 71.8
Sample C Male 69.4
Sample D Male 70.0
Dorsal hippocampus
nTPM: 77.6
Samples: 4

Max nTPM: 102.1
Min nTPM: 52.0
Sample A Female 87.2
Sample B Female 69.1
Sample C Male 102.1
Sample D Male 52.0
Entorhinal cortex
nTPM: 57.5
Samples: 4

Max nTPM: 59.9
Min nTPM: 55.3
Sample A Female 55.3
Sample B Female 59.9
Sample C Male 59.5
Sample D Male 55.3
Ventral hippocampus
nTPM: 70.2
Samples: 4

Max nTPM: 76.5
Min nTPM: 60.8
Sample A Female 67.5
Sample B Female 60.8
Sample C Male 75.9
Sample D Male 76.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.9
Samples: 4

Max nTPM: 54.4
Min nTPM: 31.3
Sample A Male 54.4
Sample B Male 44.5
Sample C Female 41.4
Sample D Female 31.3
Hippocampal formation
nTPM: 52.9
Samples: 4

Max nTPM: 56.6
Min nTPM: 46.9
Sample A Male 46.9
Sample B Male 56.3
Sample C Female 56.6
Sample D Female 51.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
75695662 Antisense, RP_060518_04_D01, Mouse strain C57BL/6J (56 days, male) 12.2
73906077 Antisense, RP_051212_04_F08, Mouse strain C57BL/6J (56 days, male) 1.8

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