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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.4
nTPM
Monaco:
168.5
nTPM
Schmiedel:
106.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.4
HPA sample
nTPM
gdT-cell nTPM: 15.1
Samples: 6
Max nTPM: 19.8
Min nTPM: 12.6
P10809_1007
14.7
P10809_1022
19.8
P10809_1041
13.5
P10809_1060
16.0
P10809_1077
12.6
P10809_1098
14.0
MAIT T-cell nTPM: 17.1
Samples: 6
Max nTPM: 24.6
Min nTPM: 9.7
P10809_1006
24.6
P10809_1024
24.0
P10809_1043
12.8
P10809_1062
13.8
P10809_1083
9.7
P10809_1097
17.8
Memory CD4 T-cell nTPM: 23.0
Samples: 6
Max nTPM: 30.2
Min nTPM: 19.4
P10809_1014
30.2
P10809_1026
19.8
P10809_1045
19.4
P10809_1064
22.2
P10809_1086
20.5
P10809_1113
25.6
Memory CD8 T-cell nTPM: 17.7
Samples: 5
Max nTPM: 27.1
Min nTPM: 14.2
P10809_1012
27.1
P10809_1027
16.6
P10809_1046
14.2
P10809_1065
14.3
P10809_1111
16.1
Naive CD4 T-cell nTPM: 30.4
Samples: 6
Max nTPM: 39.3
Min nTPM: 20.1
P10809_1015
39.3
P10809_1030
27.7
P10809_1049
20.1
P10809_1068
38.2
P10809_1085
21.1
P10809_1112
35.9
Naive CD8 T-cell nTPM: 19.0
Samples: 6
Max nTPM: 29.5
Min nTPM: 12.6
P10809_1016
29.5
P10809_1031
18.3
P10809_1050
13.8
P10809_1069
17.9
P10809_1087
12.6
P10809_1110
21.6
T-reg nTPM: 23.5
Samples: 6
Max nTPM: 34.1
Min nTPM: 15.7
P10809_1018
34.1
P10809_1037
18.4
P10809_1056
15.7
P10809_1075
18.5
P10809_1094
32.2
P10809_1106
22.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
168.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 137.8
Samples: 4
Max nTPM: 152.8
Min nTPM: 112.1
RHH5202_R3573
144.5
RHH5230_R3602
141.9
RHH5259_R3631
152.8
RHH5288_R3660
112.1
Effector memory CD8 T-cell nTPM: 99.6
Samples: 4
Max nTPM: 127.2
Min nTPM: 85.8
RHH5203_R3574
90.1
RHH5231_R3603
95.2
RHH5260_R3632
85.8
RHH5289_R3661
127.2
MAIT T-cell nTPM: 84.6
Samples: 4
Max nTPM: 96.0
Min nTPM: 69.1
RHH5233_R3605
96.0
RHH5205_R3576
94.1
RHH5262_R3634
79.1
RHH5297_R3663
69.1
Memory CD4 T-cell TFH nTPM: 153.0
Samples: 4
Max nTPM: 167.9
Min nTPM: 130.6
RHH5300_R3666
130.6
RHH5236_R3608
167.9
RHH5265_R3637
147.6
RHH5208_R3579
165.8
Memory CD4 T-cell Th1 nTPM: 146.0
Samples: 4
Max nTPM: 195.7
Min nTPM: 123.3
RHH5210_R3581
137.0
RHH5302_R3668
123.3
RHH5238_R3610
195.7
RHH5267_R3639
127.8
Memory CD4 T-cell Th1/Th17 nTPM: 165.2
Samples: 4
Max nTPM: 259.5
Min nTPM: 124.9
RHH5303_R3669
136.2
RHH5211_R3582
140.2
RHH5239_R3611
259.5
RHH5268_R3640
124.9
Memory CD4 T-cell Th17 nTPM: 144.8
Samples: 4
Max nTPM: 190.9
Min nTPM: 122.3
RHH5304_R3670
136.7
RHH5212_R3583
129.1
RHH5240_R3612
190.9
RHH5269_R3641
122.3
Memory CD4 T-cell Th2 nTPM: 135.4
Samples: 4
Max nTPM: 160.7
Min nTPM: 121.3
RHH5305_R3671
125.9
RHH5213_R3584
133.8
RHH5241_R3613
160.7
RHH5270_R3642
121.3
Naive CD4 T-cell nTPM: 168.5
Samples: 4
Max nTPM: 177.5
Min nTPM: 157.2
RHH5306_R3672
168.5
RHH5214_R3585
157.2
RHH5242_R3614
177.5
RHH5271_R3643
170.8
Naive CD8 T-cell nTPM: 150.3
Samples: 4
Max nTPM: 180.4
Min nTPM: 125.0
RHH5201_R3572
160.2
RHH5229_R3601
180.4
RHH5258_R3630
125.0
RHH5287_R3659
135.4
Non-Vd2 gdTCR nTPM: 81.5
Samples: 4
Max nTPM: 92.5
Min nTPM: 68.8
RHH5235_R3607
80.9
RHH5264_R3636
92.5
RHH5207_R3578
68.8
RHH5299_R3665
83.9
T-reg nTPM: 129.5
Samples: 4
Max nTPM: 145.3
Min nTPM: 107.7
RHH5301_R3667
107.7
RHH5237_R3609
145.3
RHH5266_R3638
126.7
RHH5209_R3580
138.1
Terminal effector memory CD4 T-cell nTPM: 118.1
Samples: 2
Max nTPM: 130.2
Min nTPM: 106.0
RHH5243_R3615
130.2
RHH5272_R3644
106.0
Terminal effector memory CD8 T-cell nTPM: 92.1
Samples: 4
Max nTPM: 106.3
Min nTPM: 69.7
RHH5232_R3604
106.3
RHH5204_R3575
69.7
RHH5261_R3633
97.4
RHH5296_R3662
94.8
Vd2 gdTCR nTPM: 94.1
Samples: 4
Max nTPM: 110.1
Min nTPM: 87.6
RHH5234_R3606
89.2
RHH5206_R3577
87.6
RHH5263_R3635
110.1
RHH5298_R3664
89.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
