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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
33.2
nTPM
HPA Brain:
51.3
nTPM
GTEx:
33.2
nTPM
FANTOM5:
62.8
Scaled Tags Per Million
Pig:
64.7
nTPM
Mouse:
20.4
nTPM
Allen mouse:
0.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
51.3
Sample id
Sample description
nTPM
Amygdala nTPM: 48.6
2695
Female, age 67, right hemisphere
53.1
2517
Female, age 94, left hemisphere
51.4
2814
Male, age 76, right hemisphere
50.3
2514
Male, age 75, right hemisphere
44.5
1987
Female, age 91, left hemisphere
43.6
Basal amygdala nTPM: 45.7
2827
Female, age 67, right hemisphere
51.3
2609
Male, age 75, right hemisphere
48.7
1955
Male, age 76, both hemispheres
48.6
2685
Female, age 94, left hemisphere
42.7
2110
Male, age 80, left hemisphere
42.3
2243
Female, age 91, right hemisphere
40.7
Central amygdala nTPM: 49.1
2826
Female, age 94, left hemisphere
55.3
2515
Male, age 75, right hemisphere
55.2
2239
Male, age 80, left hemisphere
49.2
1905
Male, age 76, both hemispheres
49.1
2701
Female, age 91, right hemisphere
36.8
Corticomedial amygdala nTPM: 40.2
2535
Female, age 67, right hemisphere
49.7
2428
Male, age 75, right hemisphere
44.7
2242
Female, age 91, right hemisphere
38.9
2829
Male, age 80, left hemisphere
38.5
2240
Male, age 76, both hemispheres
38.0
2429
Female, age 94, left hemisphere
31.6
Lateral amygdala nTPM: 51.3
2256
Male, age 80, left hemisphere
57.5
2830
Female, age 67, right hemisphere
54.1
2516
Male, age 75, right hemisphere
52.7
2534
Female, age 94, left hemisphere
50.7
2255
Female, age 91, right hemisphere
48.7
1883
Male, age 76, both hemispheres
44.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
33.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 33.2
Samples: 152
Max nTPM: 62.6
Min nTPM: 11.7
Std nTPM: 9.4
Median nTPM: 33.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
62.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
60.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
55.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
55.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
54.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
51.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
50.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
48.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
48.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
47.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
47.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
46.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
45.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
45.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
45.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
45.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
43.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
43.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
43.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
43.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
42.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
42.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
42.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
42.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
42.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
42.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
41.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
41.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
41.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
40.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
40.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
39.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
39.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
39.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
39.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
39.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
39.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
38.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
38.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
38.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
38.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
38.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
38.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
38.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
37.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
37.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
37.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
37.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
37.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
37.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
36.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
36.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
36.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
36.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
36.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
35.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
35.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
35.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
35.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
35.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
35.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
34.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
34.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
34.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
34.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
34.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
34.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
34.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
34.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
33.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
33.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
33.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
33.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
33.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
33.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
33.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
32.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
32.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
32.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
32.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
32.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
32.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
32.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
31.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
31.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
30.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
30.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
30.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
30.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
29.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
29.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
29.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
29.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
29.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
28.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
28.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
28.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
28.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
28.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
28.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
28.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
27.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
27.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
27.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
27.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
26.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
26.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
26.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
26.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
26.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
26.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
25.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
25.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
25.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
25.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
25.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
24.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
24.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
24.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
24.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
24.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
24.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
23.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
23.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
23.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
23.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
23.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
23.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
22.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
22.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
21.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
21.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
21.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
20.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
20.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
20.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
19.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
19.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
18.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
17.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
17.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
16.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
16.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
16.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
16.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
14.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
11.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
20.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 20.5
Samples: 4
Max nTPM: 22.9
Min nTPM: 18.9
Sample A
Male
21.1
Sample B
Male
18.9
Sample C
Female
22.9
Sample D
Female
18.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
