HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:33.1 nTPM
HPA Brain:47.7 nTPM
GTEx:33.1 nTPM
FANTOM5:62.1 Scaled Tags Per Million
Pig:90.6 nTPM
Mouse:16.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189Antibody HPA051647Antibody CAB012264
Glial cells HighHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.7
Sample id Sample description nTPM
Hippocampus
nTPM: 40.3
2529 Female, age 94, left hemisphere 44.3
1855 Male, age 76, left hemisphere 42.5
1898 Male, age 80, left hemisphere 42.0
2621 Female, age 67, right hemisphere 39.7
1911 Female, age 85, right hemisphere 36.6
2148 Female, age 91, left hemisphere 36.6
Dentate gyrus
nTPM: 38.5
2530 Female, age 94, left hemisphere 54.1
2531 Female, age 67, both hemispheres 39.3
2010 Male, age 76, both hemispheres 38.3
2528 Male, age 74, both hemispheres 37.7
2246 Female, age 85, both hemispheres 34.4
1927 Female, age 91, both hemispheres 27.4
Entorhinal gyrus
nTPM: 47.7
1787 Male, age 76, left hemisphere 54.9
2117 Female, age 91, right hemisphere 54.6
2764 Male, age 80, right hemisphere 49.8
2686 Male, age 75, right hemisphere 46.3
1938 Female, age 85, left hemisphere 43.5
2613 Female, age 94, left hemisphere 37.2
Hippocampus, CA1
nTPM: 37.3
2749 Male, age 80, left hemisphere 45.8
2527 Male, age 74, both hemispheres 38.5
2082 Female, age 91, right hemisphere 36.5
2045 Male, age 76, both hemispheres 32.9
1873 Female, age 85, both hemispheres 32.8
Hippocampus, CA2
nTPM: 38.2
1963 Male, age 80, left hemisphere 44.2
1940 Female, age 85, left hemisphere 40.0
2249 Male, age 74, both hemispheres 38.1
2437 Female, age 94, left hemisphere 37.4
1892 Male, age 76, both hemispheres 35.0
2113 Female, age 91, right hemisphere 34.4
Hippocampus, CA3
nTPM: 36.8
2861 Female, age 67, both hemispheres 48.2
1867 Male, age 76, both hemispheres 39.1
2620 Female, age 94, left hemisphere 38.4
2137 Male, age 80, left hemisphere 33.7
1891 Female, age 85, both hemispheres 32.6
2436 Male, age 74, both hemispheres 28.5
Parahippocampal cortex
nTPM: 38.1
2692 Male, age 74, both hemispheres 46.1
2245 Female, age 91, both hemispheres 44.1
2622 Female, age 67, right hemisphere 44.0
2532 Female, age 72, left hemisphere 41.7
1990 Female, age 91, right hemisphere 37.7
1933 Female, age 85, both hemispheres 37.1
2250 Female, age 67, right hemisphere 36.1
2018 Male, age 76, both hemispheres 32.7
1850 Male, age 80, both hemispheres 31.8
2693 Female, age 94, both hemispheres 29.4
Perirhinal gyrus
nTPM: 37.0
2848 Male, age 76, right hemisphere 44.1
1794 Male, age 80, right hemisphere 41.2
2521 Female, age 94, right hemisphere 34.8
1841 Female, age 85, right hemisphere 32.5
1847 Female, age 91, left hemisphere 32.3
Subiculum
nTPM: 39.3
1977 Female, age 85, both hemispheres 45.4
2619 Male, age 74, both hemispheres 44.8
1901 Male, age 80, both hemispheres 41.3
2042 Male, age 76, both hemispheres 39.5
2729 Female, age 91, right hemisphere 32.8
2438 Female, age 94, left hemisphere 31.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.1
Samples: 197

Max nTPM: 61.1
Min nTPM: 10.9
Std nTPM: 9.1
Median nTPM: 32.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 61.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 60.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 57.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 56.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 54.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 54.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 51.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 50.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 49.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 49.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.1
FF:10169-103B7 60 years, female 63.3
FF:10153-102I9 76 years, female 60.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.6
Pig sample Sample description nTPM
Subiculum
nTPM: 83.5
Samples: 4

Max nTPM: 107.7
Min nTPM: 72.4
Sample A Female 107.7
Sample B Female 72.4
Sample C Male 74.2
Sample D Male 79.5
Dorsal hippocampus
nTPM: 90.6
Samples: 4

Max nTPM: 115.5
Min nTPM: 74.7
Sample A Female 115.5
Sample B Female 81.6
Sample C Male 90.7
Sample D Male 74.7
Entorhinal cortex
nTPM: 82.3
Samples: 4

Max nTPM: 90.1
Min nTPM: 76.1
Sample A Female 78.6
Sample B Female 84.2
Sample C Male 90.1
Sample D Male 76.1
Ventral hippocampus
nTPM: 86.2
Samples: 4

Max nTPM: 101.9
Min nTPM: 68.6
Sample A Female 97.6
Sample B Female 68.6
Sample C Male 101.9
Sample D Male 76.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.9
Sample A Male 17.1
Sample B Male 16.2
Sample C Female 13.9
Sample D Female 17.1
Hippocampal formation
nTPM: 16.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 15.4
Sample A Male 15.8
Sample B Male 15.4
Sample C Female 16.3
Sample D Female 16.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
70545961 Antisense, RP_050623_03_C12, Mouse strain C57BL/6J (56 days, male) 0.8

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