HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:62.1 nTPM
HPA Brain:166.6 nTPM
GTEx:62.1 nTPM
FANTOM5:58.0 Scaled Tags Per Million
Pig:12.6 nTPM
Mouse:28.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 166.6
Sample id Sample description nTPM
Hippocampus
nTPM: 108.3
1911 Female, age 85, right hemisphere 160.0
2529 Female, age 94, left hemisphere 125.5
2621 Female, age 67, right hemisphere 103.7
1898 Male, age 80, left hemisphere 90.1
2148 Female, age 91, left hemisphere 88.2
1855 Male, age 76, left hemisphere 82.3
Dentate gyrus
nTPM: 121.4
2530 Female, age 94, left hemisphere 204.1
2010 Male, age 76, both hemispheres 135.8
2528 Male, age 74, both hemispheres 125.9
2246 Female, age 85, both hemispheres 115.6
2531 Female, age 67, both hemispheres 83.3
1927 Female, age 91, both hemispheres 63.7
Entorhinal gyrus
nTPM: 106.4
2764 Male, age 80, right hemisphere 160.0
2117 Female, age 91, right hemisphere 148.8
2613 Female, age 94, left hemisphere 95.6
2686 Male, age 75, right hemisphere 79.6
1938 Female, age 85, left hemisphere 79.2
1787 Male, age 76, left hemisphere 75.3
Hippocampus, CA1
nTPM: 88.8
2082 Female, age 91, right hemisphere 127.9
1873 Female, age 85, both hemispheres 107.6
2527 Male, age 74, both hemispheres 98.7
2749 Male, age 80, left hemisphere 71.5
2045 Male, age 76, both hemispheres 38.1
Hippocampus, CA2
nTPM: 121.0
1963 Male, age 80, left hemisphere 153.4
2249 Male, age 74, both hemispheres 147.3
1940 Female, age 85, left hemisphere 123.3
2113 Female, age 91, right hemisphere 122.4
2437 Female, age 94, left hemisphere 118.0
1892 Male, age 76, both hemispheres 61.6
Hippocampus, CA3
nTPM: 81.7
1891 Female, age 85, both hemispheres 188.1
1867 Male, age 76, both hemispheres 82.5
2436 Male, age 74, both hemispheres 80.5
2137 Male, age 80, left hemisphere 57.6
2620 Female, age 94, left hemisphere 51.3
2861 Female, age 67, both hemispheres 30.3
Parahippocampal cortex
nTPM: 88.9
2692 Male, age 74, both hemispheres 141.6
2532 Female, age 72, left hemisphere 133.5
1990 Female, age 91, right hemisphere 116.0
2018 Male, age 76, both hemispheres 103.3
1850 Male, age 80, both hemispheres 86.9
2245 Female, age 91, both hemispheres 83.8
1933 Female, age 85, both hemispheres 79.9
2693 Female, age 94, both hemispheres 61.5
2250 Female, age 67, right hemisphere 47.6
2622 Female, age 67, right hemisphere 34.8
Perirhinal gyrus
nTPM: 55.3
2521 Female, age 94, right hemisphere 69.6
1794 Male, age 80, right hemisphere 60.7
2848 Male, age 76, right hemisphere 58.7
1847 Female, age 91, left hemisphere 49.2
1841 Female, age 85, right hemisphere 38.2
Subiculum
nTPM: 166.6
2042 Male, age 76, both hemispheres 268.9
1901 Male, age 80, both hemispheres 212.9
1977 Female, age 85, both hemispheres 152.6
2438 Female, age 94, left hemisphere 129.5
2619 Male, age 74, both hemispheres 124.6
2729 Female, age 91, right hemisphere 111.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.1
Samples: 197

Max nTPM: 267.0
Min nTPM: 4.7
Std nTPM: 47.4
Median nTPM: 49.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 267.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 265.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 255.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 189.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 184.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 180.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 172.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 157.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 155.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 147.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 144.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.0
FF:10153-102I9 76 years, female 77.5
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.6
Pig sample Sample description nTPM
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.1
Sample A Female 5.2
Sample B Female 5.7
Sample C Male 5.1
Sample D Male 6.4
Dorsal hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 19.5
Min nTPM: 6.0
Sample A Female 15.4
Sample B Female 9.3
Sample C Male 19.5
Sample D Male 6.0
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 7.2
Min nTPM: 4.5
Sample A Female 6.5
Sample B Female 7.2
Sample C Male 4.5
Sample D Male 6.3
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 11.3
Min nTPM: 5.6
Sample A Female 8.2
Sample B Female 5.6
Sample C Male 8.2
Sample D Male 11.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 20.4
Min nTPM: 11.1
Sample A Male 20.4
Sample B Male 16.7
Sample C Female 11.1
Sample D Female 11.8
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 41.9
Min nTPM: 17.9
Sample A Male 17.9
Sample B Male 26.7
Sample C Female 41.9
Sample D Female 28.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68637838 Antisense, RP_050126_01_G01, Mouse strain C57BL/6J (56 days, male) 0.9

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