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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
335.1
nTPM
FANTOM5:
164.3
Scaled Tags Per Million
Pig:
21.8
nTPM
Allen mouse:
3.5
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
335.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 332.7
2090
Male, age 80, both hemispheres
419.7
2188
Female, age 91, both hemispheres
388.5
2301
Female, age 85, both hemispheres
370.0
1984
Male, age 76, both hemispheres
152.6
Dorsal cochlear nucleus nTPM: 242.9
2187
Female, age 91, both hemispheres
287.4
2378
Male, age 80, both hemispheres
265.2
2802
Male, age 74, right hemisphere
246.2
2058
Male, age 76, both hemispheres
222.7
2370
Male, age 61, both hemispheres
193.2
Dorsal tegmental nucleus nTPM: 217.2
2083
Male, age 80, both hemispheres
286.3
2326
Male, age 74, both hemispheres
224.5
1936
Male, age 76, left hemisphere
215.6
2358
Male, age 61, both hemispheres
142.2
Dorsolateral tegmental area nTPM: 257.6
2751
Female, age 85, both hemispheres
349.7
2337
Male, age 61, both hemispheres
341.9
2654
Male, age 80, both hemispheres
268.0
2360
Male, age 74, both hemispheres
182.5
2141
Male, age 76, both hemispheres
145.9
Kolliker-Fuse nucleus nTPM: 265.2
2793
Female, age 91, left hemisphere
389.4
2163
Male, age 80, both hemispheres
247.6
2315
Male, age 76, right hemisphere
158.4
Lateral lemniscal nuclei nTPM: 275.4
2320
Female, age 91, left hemisphere
352.7
2746
Female, age 85, left hemisphere
312.9
2036
Male, age 80, both hemispheres
285.6
2453
Male, age 74, right hemisphere
224.6
2169
Male, age 76, both hemispheres
201.3
Lateral parabrachial nucleus nTPM: 284.9
2792
Male, age 76, both hemispheres
398.1
2013
Male, age 80, both hemispheres
345.8
2790
Male, age 61, both hemispheres
202.0
2139
Female, age 85, right hemisphere
193.8
Lateral vestibular nucleus nTPM: 255.9
2311
Male, age 80, both hemispheres
257.2
2184
Male, age 76, both hemispheres
254.7
Locus coeruleus nTPM: 122.7
2162
Male, age 80, both hemispheres
161.2
2720
Male, age 74, both hemispheres
155.2
2317
Female, age 72, unknown
134.9
2123
Female, age 91, both hemispheres
111.9
2788
Male, age 74, unknown
104.1
2014
Male, age 55, unknown
103.8
1980
Male, age 76, both hemispheres
87.5
Medial parabrachial nucleus nTPM: 259.6
2463
Female, age 85, right hemisphere
302.5
2170
Female, age 91, both hemispheres
288.3
2854
Male, age 80, both hemispheres
263.3
2786
Male, age 76, both hemispheres
257.9
2156
Male, age 61, both hemispheres
186.1
Medial periolivary nuclei nTPM: 267.2
2081
Male, age 80, both hemispheres
382.9
2458
Female, age 91, both hemispheres
331.9
2791
Male, age 74, right hemisphere
279.9
2171
Female, age 85, both hemispheres
172.6
2063
Male, age 76, both hemispheres
168.5
Motor facial nucleus nTPM: 276.9
2126
Male, age 61, both hemispheres
436.7
2697
Female, age 85, both hemispheres
359.8
2365
Male, age 74, right hemisphere
278.4
2327
Male, age 80, both hemispheres
224.4
2795
Female, age 91, both hemispheres
215.2
2062
Male, age 76, both hemispheres
147.1
Motor trigeminal nucleus nTPM: 281.0
2321
Female, age 91, both hemispheres
322.7
2560
Male, age 74, both hemispheres
300.7
2309
Male, age 76, both hemispheres
300.4
2079
Male, age 80, both hemispheres
264.3
2335
Male, age 61, both hemispheres
216.8
Nuclei of the trapezoid body nTPM: 234.1
2166
Male, age 80, both hemispheres
345.2
2159
Male, age 61, both hemispheres
268.4
2368
Female, age 91, both hemispheres
264.0
1983
Male, age 76, both hemispheres
164.1
2735
Female, age 85, both hemispheres
128.9
Nucleus raphe magnus nTPM: 205.2
2459
Female, age 91, both hemispheres
299.7
2328
Male, age 80, both hemispheres
262.1
2051
Male, age 76, both hemispheres
240.7
2455
Male, age 74, both hemispheres
209.1
2160
Male, age 61, both hemispheres
112.8
2172
Female, age 85, both hemispheres
107.1
Paramedian reticular nucleus nTPM: 263.2
2052
Male, age 76, both hemispheres
332.9
2057
Male, age 80, both hemispheres
291.7
2050
Female, age 85, both hemispheres
243.8
2313
Male, age 61, both hemispheres
184.2
Pedunculopontine tegmental nucleus nTPM: 224.6
2338
Male, age 61, both hemispheres
258.1
2334
Male, age 80, both hemispheres
223.7
1921
Female, age 85, both hemispheres
192.1
Pontine nuclei nTPM: 299.5
2454
Male, age 74, left hemisphere
395.3
2115
Male, age 80, left hemisphere
393.2
2319
Female, age 91, both hemispheres
379.3
2109
Female, age 72, unknown
295.2
1968
Male, age 76, left hemisphere
290.8
1863
Male, age 55, unknown
240.5
2727
Male, age 61, right hemisphere
210.6
2787
Female, age 85, both hemispheres
191.2
Pontine raphe nucleus nTPM: 169.4
2122
Female, age 85, midline
177.9
2853
Male, age 76, midline
160.8
Posteroventral cochlear nucleus nTPM: 335.1
2135
Female, age 91, both hemispheres
502.8
2341
Male, age 80, both hemispheres
413.8
2070
Male, age 76, both hemispheres
312.0
2371
Male, age 61, both hemispheres
246.2
2752
Female, age 85, both hemispheres
200.7
Principal sensory trigeminal nucleus nTPM: 251.5
2367
Female, age 91, left hemisphere
361.3
2324
Male, age 76, both hemispheres
238.8
2008
Male, age 80, left hemisphere
232.5
2158
Male, age 61, both hemispheres
173.6
Reticular pontine nucleus, caudal nTPM: 290.5
2559
Male, age 74, both hemispheres
357.9
2457
Female, age 91, both hemispheres
308.6
2092
Male, age 76, both hemispheres
282.2
2332
Male, age 80, right hemisphere
213.4
Reticular pontine nucleus, oral nTPM: 294.6
2366
Female, age 91, both hemispheres
376.7
1939
Male, age 80, both hemispheres
291.0
2012
Female, age 85, both hemispheres
273.8
2167
Male, age 76, both hemispheres
270.2
2361
Male, age 74, both hemispheres
261.0
Reticulotegmental nucleus nTPM: 219.2
2452
Male, age 74, both hemispheres
249.5
2333
Male, age 80, both hemispheres
237.5
2322
Female, age 91, both hemispheres
235.2
2325
Male, age 76, both hemispheres
154.6
Spinal trigeminal nucleus, oral nTPM: 225.9
2164
Male, age 80, both hemispheres
277.4
1978
Male, age 76, both hemispheres
223.2
2737
Female, age 85, both hemispheres
177.2
Subcoeruleus area nTPM: 256.3
2369
Female, age 85, left hemisphere
415.1
2089
Male, age 76, left hemisphere
278.4
1958
Male, age 80, both hemispheres
216.3
2451
Male, age 74, both hemispheres
210.0
2323
Female, age 91, left hemisphere
161.8
Superior olive nTPM: 297.5
2020
Male, age 76, both hemispheres
324.7
2329
Male, age 80, right hemisphere
320.5
2561
Female, age 91, both hemispheres
315.8
2364
Male, age 74, right hemisphere
272.6
1875
Female, age 85, both hemispheres
253.8
Ventral periolivary nuclei nTPM: 254.8
2023
Male, age 76, both hemispheres
355.6
2794
Female, age 91, left hemisphere
263.1
2165
Male, age 80, both hemispheres
225.1
2130
Female, age 85, both hemispheres
175.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 281.2
2456
Female, age 91, both hemispheres
347.3
2840
Female, age 85, both hemispheres
291.7
2359
Male, age 61, both hemispheres
285.4
1959
Male, age 76, both hemispheres
278.4
2161
Male, age 80, both hemispheres
254.6
2449
Male, age 74, both hemispheres
229.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
21.8
Pig sample
Sample description
nTPM
Pons nTPM: 21.8
Samples: 4
Max nTPM: 30.3
Min nTPM: 16.6
Sample A
Female
16.6
Sample B
Female
21.6
Sample C
Male
18.8
Sample D
Male
30.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
