HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:85.1 nTPM
HPA Brain:89.5 nTPM
GTEx:85.1 nTPM
FANTOM5:213.1 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:16.6 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047549Antibody HPA062226Antibody CAB004254
Glial cells HighMediumHigh
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.5
Sample id Sample description nTPM
Hippocampus
nTPM: 72.8
1898 Male, age 80, left hemisphere 93.8
2529 Female, age 94, left hemisphere 77.5
1855 Male, age 76, left hemisphere 72.1
2621 Female, age 67, right hemisphere 67.0
2148 Female, age 91, left hemisphere 64.3
1911 Female, age 85, right hemisphere 62.1
Dentate gyrus
nTPM: 70.6
1927 Female, age 91, both hemispheres 81.1
2010 Male, age 76, both hemispheres 79.6
2528 Male, age 74, both hemispheres 70.6
2530 Female, age 94, left hemisphere 69.6
2246 Female, age 85, both hemispheres 67.3
2531 Female, age 67, both hemispheres 55.4
Entorhinal gyrus
nTPM: 73.1
2764 Male, age 80, right hemisphere 84.4
1938 Female, age 85, left hemisphere 83.9
2117 Female, age 91, right hemisphere 77.0
1787 Male, age 76, left hemisphere 74.1
2613 Female, age 94, left hemisphere 61.8
2686 Male, age 75, right hemisphere 57.2
Hippocampus, CA1
nTPM: 77.7
2749 Male, age 80, left hemisphere 103.2
1873 Female, age 85, both hemispheres 79.6
2527 Male, age 74, both hemispheres 72.0
2045 Male, age 76, both hemispheres 67.4
2082 Female, age 91, right hemisphere 66.1
Hippocampus, CA2
nTPM: 77.9
1892 Male, age 76, both hemispheres 93.0
1963 Male, age 80, left hemisphere 89.4
2249 Male, age 74, both hemispheres 82.4
1940 Female, age 85, left hemisphere 73.9
2113 Female, age 91, right hemisphere 64.3
2437 Female, age 94, left hemisphere 64.1
Hippocampus, CA3
nTPM: 71.4
2436 Male, age 74, both hemispheres 82.9
1867 Male, age 76, both hemispheres 82.6
2137 Male, age 80, left hemisphere 80.8
1891 Female, age 85, both hemispheres 75.5
2620 Female, age 94, left hemisphere 58.2
2861 Female, age 67, both hemispheres 48.5
Parahippocampal cortex
nTPM: 71.3
1850 Male, age 80, both hemispheres 94.8
1990 Female, age 91, right hemisphere 81.0
1933 Female, age 85, both hemispheres 79.6
2250 Female, age 67, right hemisphere 74.4
2532 Female, age 72, left hemisphere 70.3
2245 Female, age 91, both hemispheres 70.2
2018 Male, age 76, both hemispheres 70.0
2693 Female, age 94, both hemispheres 62.4
2692 Male, age 74, both hemispheres 60.0
2622 Female, age 67, right hemisphere 50.4
Perirhinal gyrus
nTPM: 89.5
1847 Female, age 91, left hemisphere 102.9
1841 Female, age 85, right hemisphere 93.8
1794 Male, age 80, right hemisphere 92.7
2521 Female, age 94, right hemisphere 79.5
2848 Male, age 76, right hemisphere 78.9
Subiculum
nTPM: 71.8
1977 Female, age 85, both hemispheres 84.6
1901 Male, age 80, both hemispheres 80.6
2042 Male, age 76, both hemispheres 68.8
2619 Male, age 74, both hemispheres 66.9
2438 Female, age 94, left hemisphere 65.4
2729 Female, age 91, right hemisphere 64.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.1
Samples: 197

Max nTPM: 123.5
Min nTPM: 59.1
Std nTPM: 12.3
Median nTPM: 83.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 123.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 118.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 118.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 117.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 116.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 111.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 110.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 110.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 108.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 107.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 107.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 213.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 213.1
FF:10169-103B7 60 years, female 292.8
FF:10153-102I9 76 years, female 133.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Subiculum
nTPM: 13.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.4
Sample A Female 16.3
Sample B Female 15.0
Sample C Male 12.5
Sample D Male 10.4
Dorsal hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 24.0
Min nTPM: 12.3
Sample A Female 24.0
Sample B Female 18.7
Sample C Male 15.0
Sample D Male 12.3
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 9.2
Sample A Female 11.9
Sample B Female 16.3
Sample C Male 10.6
Sample D Male 9.2
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.4
Sample A Female 16.2
Sample B Female 12.4
Sample C Male 14.9
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.7
Min nTPM: 11.1
Sample A Male 15.5
Sample B Male 14.1
Sample C Female 15.7
Sample D Female 11.1
Hippocampal formation
nTPM: 16.6
Samples: 4

Max nTPM: 18.9
Min nTPM: 15.0
Sample A Male 18.9
Sample B Male 15.0
Sample C Female 15.5
Sample D Female 16.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
68631893 Antisense, RP_050125_01_C09, Mouse strain C57BL/6J (56 days, male) 1.9

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