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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
100.7
nTPM
FANTOM5:
90.4
Scaled Tags Per Million
Pig:
51.0
nTPM
Allen mouse:
4.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
100.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 89.1
1984
Male, age 76, both hemispheres
99.4
2301
Female, age 85, both hemispheres
95.9
2090
Male, age 80, both hemispheres
83.1
2188
Female, age 91, both hemispheres
78.0
Dorsal cochlear nucleus nTPM: 92.7
2802
Male, age 74, right hemisphere
100.7
2370
Male, age 61, both hemispheres
95.5
2378
Male, age 80, both hemispheres
93.5
2058
Male, age 76, both hemispheres
87.2
2187
Female, age 91, both hemispheres
86.8
Dorsal tegmental nucleus nTPM: 93.3
2358
Male, age 61, both hemispheres
108.8
2083
Male, age 80, both hemispheres
98.8
1936
Male, age 76, left hemisphere
88.4
2326
Male, age 74, both hemispheres
77.2
Dorsolateral tegmental area nTPM: 82.3
2654
Male, age 80, both hemispheres
93.2
2337
Male, age 61, both hemispheres
89.7
2141
Male, age 76, both hemispheres
87.4
2751
Female, age 85, both hemispheres
72.5
2360
Male, age 74, both hemispheres
68.9
Kolliker-Fuse nucleus nTPM: 84.3
2793
Female, age 91, left hemisphere
96.4
2163
Male, age 80, both hemispheres
93.0
2315
Male, age 76, right hemisphere
63.5
Lateral lemniscal nuclei nTPM: 90.6
2320
Female, age 91, left hemisphere
104.8
2169
Male, age 76, both hemispheres
98.8
2453
Male, age 74, right hemisphere
91.4
2746
Female, age 85, left hemisphere
84.6
2036
Male, age 80, both hemispheres
73.5
Lateral parabrachial nucleus nTPM: 85.9
2790
Male, age 61, both hemispheres
113.4
2139
Female, age 85, right hemisphere
90.9
2013
Male, age 80, both hemispheres
78.2
2792
Male, age 76, both hemispheres
61.1
Lateral vestibular nucleus nTPM: 100.7
2184
Male, age 76, both hemispheres
102.4
2311
Male, age 80, both hemispheres
99.1
Locus coeruleus nTPM: 79.2
2720
Male, age 74, both hemispheres
87.9
2162
Male, age 80, both hemispheres
84.5
2317
Female, age 72, unknown
84.4
2123
Female, age 91, both hemispheres
84.2
1980
Male, age 76, both hemispheres
79.3
2014
Male, age 55, unknown
68.9
2788
Male, age 74, unknown
65.1
Medial parabrachial nucleus nTPM: 92.2
2156
Male, age 61, both hemispheres
112.4
2786
Male, age 76, both hemispheres
95.7
2463
Female, age 85, right hemisphere
85.3
2854
Male, age 80, both hemispheres
84.1
2170
Female, age 91, both hemispheres
83.6
Medial periolivary nuclei nTPM: 89.7
2171
Female, age 85, both hemispheres
102.3
2063
Male, age 76, both hemispheres
97.0
2458
Female, age 91, both hemispheres
90.8
2081
Male, age 80, both hemispheres
82.4
2791
Male, age 74, right hemisphere
76.0
Motor facial nucleus nTPM: 93.1
2062
Male, age 76, both hemispheres
107.8
2327
Male, age 80, both hemispheres
98.0
2795
Female, age 91, both hemispheres
94.4
2126
Male, age 61, both hemispheres
93.0
2697
Female, age 85, both hemispheres
82.7
2365
Male, age 74, right hemisphere
82.5
Motor trigeminal nucleus nTPM: 96.4
2321
Female, age 91, both hemispheres
103.8
2309
Male, age 76, both hemispheres
101.3
2560
Male, age 74, both hemispheres
98.9
2335
Male, age 61, both hemispheres
92.8
2079
Male, age 80, both hemispheres
85.4
Nuclei of the trapezoid body nTPM: 97.1
1983
Male, age 76, both hemispheres
103.7
2368
Female, age 91, both hemispheres
102.4
2735
Female, age 85, both hemispheres
101.9
2166
Male, age 80, both hemispheres
95.6
2159
Male, age 61, both hemispheres
82.0
Nucleus raphe magnus nTPM: 94.8
2172
Female, age 85, both hemispheres
109.7
2328
Male, age 80, both hemispheres
101.6
2459
Female, age 91, both hemispheres
92.7
2051
Male, age 76, both hemispheres
91.1
2455
Male, age 74, both hemispheres
90.0
2160
Male, age 61, both hemispheres
84.0
Paramedian reticular nucleus nTPM: 78.4
2313
Male, age 61, both hemispheres
86.7
2057
Male, age 80, both hemispheres
86.4
2050
Female, age 85, both hemispheres
77.8
2052
Male, age 76, both hemispheres
62.5
Pedunculopontine tegmental nucleus nTPM: 83.5
1921
Female, age 85, both hemispheres
85.3
2338
Male, age 61, both hemispheres
83.7
2334
Male, age 80, both hemispheres
81.4
Pontine nuclei nTPM: 91.1
2787
Female, age 85, both hemispheres
114.9
1968
Male, age 76, left hemisphere
113.1
2115
Male, age 80, left hemisphere
95.6
1863
Male, age 55, unknown
91.0
2109
Female, age 72, unknown
89.1
2319
Female, age 91, both hemispheres
80.7
2454
Male, age 74, left hemisphere
78.6
2727
Male, age 61, right hemisphere
65.8
Pontine raphe nucleus nTPM: 80.6
2853
Male, age 76, midline
81.0
2122
Female, age 85, midline
80.2
Posteroventral cochlear nucleus nTPM: 83.1
2371
Male, age 61, both hemispheres
95.6
2752
Female, age 85, both hemispheres
90.4
2070
Male, age 76, both hemispheres
84.1
2341
Male, age 80, both hemispheres
76.3
2135
Female, age 91, both hemispheres
69.0
Principal sensory trigeminal nucleus nTPM: 88.1
2324
Male, age 76, both hemispheres
99.8
2367
Female, age 91, left hemisphere
87.3
2008
Male, age 80, left hemisphere
83.0
2158
Male, age 61, both hemispheres
82.2
Reticular pontine nucleus, caudal nTPM: 93.1
2332
Male, age 80, right hemisphere
100.2
2457
Female, age 91, both hemispheres
92.3
2559
Male, age 74, both hemispheres
90.3
2092
Male, age 76, both hemispheres
89.5
Reticular pontine nucleus, oral nTPM: 81.7
2366
Female, age 91, both hemispheres
90.2
2361
Male, age 74, both hemispheres
81.0
2167
Male, age 76, both hemispheres
80.3
1939
Male, age 80, both hemispheres
79.5
2012
Female, age 85, both hemispheres
77.3
Reticulotegmental nucleus nTPM: 92.9
2452
Male, age 74, both hemispheres
97.7
2333
Male, age 80, both hemispheres
92.8
2322
Female, age 91, both hemispheres
92.0
2325
Male, age 76, both hemispheres
89.2
Spinal trigeminal nucleus, oral nTPM: 100.7
1978
Male, age 76, both hemispheres
107.6
2164
Male, age 80, both hemispheres
102.5
2737
Female, age 85, both hemispheres
92.0
Subcoeruleus area nTPM: 85.7
2089
Male, age 76, left hemisphere
95.6
2323
Female, age 91, left hemisphere
91.8
2451
Male, age 74, both hemispheres
91.4
1958
Male, age 80, both hemispheres
80.6
2369
Female, age 85, left hemisphere
68.9
Superior olive nTPM: 91.1
2561
Female, age 91, both hemispheres
104.6
2329
Male, age 80, right hemisphere
97.0
2020
Male, age 76, both hemispheres
86.9
1875
Female, age 85, both hemispheres
85.6
2364
Male, age 74, right hemisphere
81.5
Ventral periolivary nuclei nTPM: 92.4
2130
Female, age 85, both hemispheres
100.7
2165
Male, age 80, both hemispheres
96.0
2794
Female, age 91, left hemisphere
94.3
2023
Male, age 76, both hemispheres
78.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 87.4
2456
Female, age 91, both hemispheres
95.4
1959
Male, age 76, both hemispheres
90.5
2161
Male, age 80, both hemispheres
88.4
2449
Male, age 74, both hemispheres
85.8
2359
Male, age 61, both hemispheres
83.6
2840
Female, age 85, both hemispheres
80.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
51.0
Pig sample
Sample description
nTPM
Pons nTPM: 51.0
Samples: 4
Max nTPM: 67.3
Min nTPM: 39.5
Sample A
Female
67.3
Sample B
Female
39.5
Sample C
Male
41.5
Sample D
Male
55.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
