HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:85.7 nTPM
HPA Brain:111.3 nTPM
GTEx:85.7 nTPM
FANTOM5:94.9 Scaled Tags Per Million
Pig:75.0 nTPM
Mouse:78.9 nTPM
Allen mouse:10.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044037
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 111.3
Sample id Sample description nTPM
Hippocampus
nTPM: 111.3
2621 Female, age 67, right hemisphere 134.3
2529 Female, age 94, left hemisphere 121.2
2148 Female, age 91, left hemisphere 120.6
1911 Female, age 85, right hemisphere 102.2
1898 Male, age 80, left hemisphere 97.4
1855 Male, age 76, left hemisphere 92.0
Dentate gyrus
nTPM: 100.9
2531 Female, age 67, both hemispheres 133.1
1927 Female, age 91, both hemispheres 104.7
2530 Female, age 94, left hemisphere 104.5
2528 Male, age 74, both hemispheres 92.6
2246 Female, age 85, both hemispheres 86.2
2010 Male, age 76, both hemispheres 84.6
Entorhinal gyrus
nTPM: 110.4
2613 Female, age 94, left hemisphere 122.3
2686 Male, age 75, right hemisphere 121.2
2764 Male, age 80, right hemisphere 115.7
1787 Male, age 76, left hemisphere 105.1
2117 Female, age 91, right hemisphere 101.6
1938 Female, age 85, left hemisphere 96.5
Hippocampus, CA1
nTPM: 96.2
2527 Male, age 74, both hemispheres 102.6
2082 Female, age 91, right hemisphere 98.8
2749 Male, age 80, left hemisphere 96.1
1873 Female, age 85, both hemispheres 92.7
2045 Male, age 76, both hemispheres 90.9
Hippocampus, CA2
nTPM: 100.3
1963 Male, age 80, left hemisphere 120.4
2437 Female, age 94, left hemisphere 109.2
2113 Female, age 91, right hemisphere 104.9
1940 Female, age 85, left hemisphere 93.8
1892 Male, age 76, both hemispheres 89.1
2249 Male, age 74, both hemispheres 84.2
Hippocampus, CA3
nTPM: 105.4
2861 Female, age 67, both hemispheres 145.1
2620 Female, age 94, left hemisphere 123.1
2137 Male, age 80, left hemisphere 95.5
1867 Male, age 76, both hemispheres 91.5
2436 Male, age 74, both hemispheres 89.8
1891 Female, age 85, both hemispheres 87.6
Parahippocampal cortex
nTPM: 105.8
2245 Female, age 91, both hemispheres 130.4
2622 Female, age 67, right hemisphere 127.7
2693 Female, age 94, both hemispheres 107.7
2250 Female, age 67, right hemisphere 107.3
2532 Female, age 72, left hemisphere 104.6
1933 Female, age 85, both hemispheres 101.1
1990 Female, age 91, right hemisphere 99.1
2692 Male, age 74, both hemispheres 97.3
2018 Male, age 76, both hemispheres 94.8
1850 Male, age 80, both hemispheres 88.6
Perirhinal gyrus
nTPM: 103.0
2521 Female, age 94, right hemisphere 112.5
1847 Female, age 91, left hemisphere 106.7
1794 Male, age 80, right hemisphere 101.9
1841 Female, age 85, right hemisphere 99.6
2848 Male, age 76, right hemisphere 94.0
Subiculum
nTPM: 98.0
2619 Male, age 74, both hemispheres 106.9
2729 Female, age 91, right hemisphere 104.5
1977 Female, age 85, both hemispheres 103.2
2438 Female, age 94, left hemisphere 96.6
1901 Male, age 80, both hemispheres 89.9
2042 Male, age 76, both hemispheres 87.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.7
Samples: 197

Max nTPM: 191.3
Min nTPM: 27.8
Std nTPM: 26.1
Median nTPM: 81.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 191.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 171.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 166.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 155.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 142.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 141.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 136.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 135.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 133.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 133.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 133.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.9
FF:10153-102I9 76 years, female 109.8
FF:10169-103B7 60 years, female 79.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.0
Pig sample Sample description nTPM
Subiculum
nTPM: 62.8
Samples: 4

Max nTPM: 85.6
Min nTPM: 49.9
Sample A Female 85.6
Sample B Female 54.9
Sample C Male 60.6
Sample D Male 49.9
Dorsal hippocampus
nTPM: 72.2
Samples: 4

Max nTPM: 89.3
Min nTPM: 56.0
Sample A Female 89.3
Sample B Female 76.0
Sample C Male 67.4
Sample D Male 56.0
Entorhinal cortex
nTPM: 75.0
Samples: 4

Max nTPM: 89.5
Min nTPM: 61.2
Sample A Female 75.6
Sample B Female 73.5
Sample C Male 89.5
Sample D Male 61.2
Ventral hippocampus
nTPM: 71.8
Samples: 4

Max nTPM: 87.0
Min nTPM: 51.4
Sample A Female 63.4
Sample B Female 51.4
Sample C Male 85.2
Sample D Male 87.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.9
Samples: 4

Max nTPM: 81.1
Min nTPM: 76.5
Sample A Male 79.5
Sample B Male 78.5
Sample C Female 81.1
Sample D Female 76.5
Hippocampal formation
nTPM: 72.2
Samples: 4

Max nTPM: 74.4
Min nTPM: 69.5
Sample A Male 73.5
Sample B Male 69.5
Sample C Female 71.2
Sample D Female 74.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.3
71211353 Antisense, RP_050816_01_C11, Mouse strain C57BL/6J (56 days, male) 10.3

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