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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
174.7
nTPM
FANTOM5:
344.2
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
174.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 173.9
1984
Male, age 76, both hemispheres
273.6
2301
Female, age 85, both hemispheres
153.2
2188
Female, age 91, both hemispheres
139.2
2090
Male, age 80, both hemispheres
129.8
Dorsal cochlear nucleus nTPM: 152.3
2802
Male, age 74, right hemisphere
202.6
2187
Female, age 91, both hemispheres
171.1
2370
Male, age 61, both hemispheres
133.9
2058
Male, age 76, both hemispheres
127.8
2378
Male, age 80, both hemispheres
126.0
Dorsal tegmental nucleus nTPM: 128.6
2326
Male, age 74, both hemispheres
180.0
2083
Male, age 80, both hemispheres
148.7
1936
Male, age 76, left hemisphere
110.5
2358
Male, age 61, both hemispheres
75.2
Dorsolateral tegmental area nTPM: 141.5
2360
Male, age 74, both hemispheres
193.4
2751
Female, age 85, both hemispheres
171.4
2654
Male, age 80, both hemispheres
154.4
2141
Male, age 76, both hemispheres
122.4
2337
Male, age 61, both hemispheres
65.7
Kolliker-Fuse nucleus nTPM: 121.2
2163
Male, age 80, both hemispheres
136.3
2315
Male, age 76, right hemisphere
124.4
2793
Female, age 91, left hemisphere
103.1
Lateral lemniscal nuclei nTPM: 138.4
2169
Male, age 76, both hemispheres
187.6
2746
Female, age 85, left hemisphere
150.1
2036
Male, age 80, both hemispheres
142.1
2320
Female, age 91, left hemisphere
109.4
2453
Male, age 74, right hemisphere
103.1
Lateral parabrachial nucleus nTPM: 123.8
2013
Male, age 80, both hemispheres
174.1
2139
Female, age 85, right hemisphere
144.3
2792
Male, age 76, both hemispheres
111.8
2790
Male, age 61, both hemispheres
65.1
Lateral vestibular nucleus nTPM: 138.7
2311
Male, age 80, both hemispheres
144.6
2184
Male, age 76, both hemispheres
132.9
Locus coeruleus nTPM: 174.7
2014
Male, age 55, unknown
244.6
2317
Female, age 72, unknown
203.9
2162
Male, age 80, both hemispheres
172.9
2788
Male, age 74, unknown
162.8
2123
Female, age 91, both hemispheres
158.3
2720
Male, age 74, both hemispheres
145.5
1980
Male, age 76, both hemispheres
135.0
Medial parabrachial nucleus nTPM: 137.4
2463
Female, age 85, right hemisphere
180.3
2170
Female, age 91, both hemispheres
168.9
2854
Male, age 80, both hemispheres
130.5
2786
Male, age 76, both hemispheres
123.9
2156
Male, age 61, both hemispheres
83.4
Medial periolivary nuclei nTPM: 130.5
2063
Male, age 76, both hemispheres
183.7
2171
Female, age 85, both hemispheres
151.6
2791
Male, age 74, right hemisphere
114.9
2458
Female, age 91, both hemispheres
103.7
2081
Male, age 80, both hemispheres
98.6
Motor facial nucleus nTPM: 132.3
2062
Male, age 76, both hemispheres
192.8
2365
Male, age 74, right hemisphere
156.8
2795
Female, age 91, both hemispheres
129.5
2327
Male, age 80, both hemispheres
108.5
2697
Female, age 85, both hemispheres
107.5
2126
Male, age 61, both hemispheres
98.5
Motor trigeminal nucleus nTPM: 115.3
2309
Male, age 76, both hemispheres
135.9
2321
Female, age 91, both hemispheres
123.2
2560
Male, age 74, both hemispheres
114.6
2079
Male, age 80, both hemispheres
103.1
2335
Male, age 61, both hemispheres
99.6
Nuclei of the trapezoid body nTPM: 148.9
1983
Male, age 76, both hemispheres
227.7
2735
Female, age 85, both hemispheres
144.2
2159
Male, age 61, both hemispheres
129.1
2166
Male, age 80, both hemispheres
125.8
2368
Female, age 91, both hemispheres
117.7
Nucleus raphe magnus nTPM: 149.5
2051
Male, age 76, both hemispheres
190.3
2455
Male, age 74, both hemispheres
158.1
2172
Female, age 85, both hemispheres
152.3
2160
Male, age 61, both hemispheres
146.2
2328
Male, age 80, both hemispheres
131.6
2459
Female, age 91, both hemispheres
118.4
Paramedian reticular nucleus nTPM: 152.7
2050
Female, age 85, both hemispheres
182.3
2052
Male, age 76, both hemispheres
155.2
2313
Male, age 61, both hemispheres
144.7
2057
Male, age 80, both hemispheres
128.5
Pedunculopontine tegmental nucleus nTPM: 149.9
1921
Female, age 85, both hemispheres
194.7
2334
Male, age 80, both hemispheres
168.9
2338
Male, age 61, both hemispheres
86.0
Pontine nuclei nTPM: 131.9
1968
Male, age 76, left hemisphere
182.1
2787
Female, age 85, both hemispheres
146.4
2454
Male, age 74, left hemisphere
137.2
2727
Male, age 61, right hemisphere
133.8
1863
Male, age 55, unknown
129.9
2109
Female, age 72, unknown
126.6
2319
Female, age 91, both hemispheres
116.4
2115
Male, age 80, left hemisphere
82.7
Pontine raphe nucleus nTPM: 156.6
2122
Female, age 85, midline
157.7
2853
Male, age 76, midline
155.6
Posteroventral cochlear nucleus nTPM: 129.2
2752
Female, age 85, both hemispheres
172.0
2371
Male, age 61, both hemispheres
138.8
2070
Male, age 76, both hemispheres
138.2
2341
Male, age 80, both hemispheres
118.3
2135
Female, age 91, both hemispheres
78.7
Principal sensory trigeminal nucleus nTPM: 123.9
2008
Male, age 80, left hemisphere
145.9
2158
Male, age 61, both hemispheres
120.4
2324
Male, age 76, both hemispheres
117.0
2367
Female, age 91, left hemisphere
112.5
Reticular pontine nucleus, caudal nTPM: 129.7
2092
Male, age 76, both hemispheres
149.5
2559
Male, age 74, both hemispheres
136.5
2457
Female, age 91, both hemispheres
122.6
2332
Male, age 80, right hemisphere
110.4
Reticular pontine nucleus, oral nTPM: 145.6
2012
Female, age 85, both hemispheres
200.6
2167
Male, age 76, both hemispheres
159.4
1939
Male, age 80, both hemispheres
155.6
2366
Female, age 91, both hemispheres
129.8
2361
Male, age 74, both hemispheres
82.8
Reticulotegmental nucleus nTPM: 144.5
2322
Female, age 91, both hemispheres
154.0
2333
Male, age 80, both hemispheres
145.2
2452
Male, age 74, both hemispheres
143.8
2325
Male, age 76, both hemispheres
135.1
Spinal trigeminal nucleus, oral nTPM: 162.3
2737
Female, age 85, both hemispheres
192.1
1978
Male, age 76, both hemispheres
167.2
2164
Male, age 80, both hemispheres
127.7
Subcoeruleus area nTPM: 166.8
2451
Male, age 74, both hemispheres
206.3
2323
Female, age 91, left hemisphere
205.8
2369
Female, age 85, left hemisphere
157.3
1958
Male, age 80, both hemispheres
138.6
2089
Male, age 76, left hemisphere
125.8
Superior olive nTPM: 148.2
2364
Male, age 74, right hemisphere
185.0
2020
Male, age 76, both hemispheres
182.4
1875
Female, age 85, both hemispheres
162.6
2561
Female, age 91, both hemispheres
109.6
2329
Male, age 80, right hemisphere
101.2
Ventral periolivary nuclei nTPM: 130.0
2165
Male, age 80, both hemispheres
150.2
2023
Male, age 76, both hemispheres
143.7
2130
Female, age 85, both hemispheres
116.8
2794
Female, age 91, left hemisphere
109.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 128.1
1959
Male, age 76, both hemispheres
151.8
2161
Male, age 80, both hemispheres
139.1
2840
Female, age 85, both hemispheres
134.7
2456
Female, age 91, both hemispheres
123.9
2449
Male, age 74, both hemispheres
122.9
2359
Male, age 61, both hemispheres
96.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
