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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
380.7
nTPM
FANTOM5:
825.1
Scaled Tags Per Million
Pig:
313.0
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
380.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 343.9
2301
Female, age 85, both hemispheres
414.4
2090
Male, age 80, both hemispheres
323.3
2188
Female, age 91, both hemispheres
322.5
1984
Male, age 76, both hemispheres
315.6
Dorsal cochlear nucleus nTPM: 325.3
2802
Male, age 74, right hemisphere
347.7
2378
Male, age 80, both hemispheres
338.8
2187
Female, age 91, both hemispheres
333.5
2370
Male, age 61, both hemispheres
306.5
2058
Male, age 76, both hemispheres
300.3
Dorsal tegmental nucleus nTPM: 342.2
2358
Male, age 61, both hemispheres
372.4
2083
Male, age 80, both hemispheres
362.1
2326
Male, age 74, both hemispheres
327.4
1936
Male, age 76, left hemisphere
307.0
Dorsolateral tegmental area nTPM: 334.3
2337
Male, age 61, both hemispheres
405.1
2654
Male, age 80, both hemispheres
351.5
2751
Female, age 85, both hemispheres
317.5
2360
Male, age 74, both hemispheres
310.8
2141
Male, age 76, both hemispheres
286.6
Kolliker-Fuse nucleus nTPM: 373.6
2315
Male, age 76, right hemisphere
396.8
2793
Female, age 91, left hemisphere
369.4
2163
Male, age 80, both hemispheres
354.6
Lateral lemniscal nuclei nTPM: 331.3
2169
Male, age 76, both hemispheres
353.0
2746
Female, age 85, left hemisphere
341.2
2036
Male, age 80, both hemispheres
337.4
2320
Female, age 91, left hemisphere
324.2
2453
Male, age 74, right hemisphere
300.4
Lateral parabrachial nucleus nTPM: 350.7
2792
Male, age 76, both hemispheres
385.7
2139
Female, age 85, right hemisphere
365.1
2013
Male, age 80, both hemispheres
348.3
2790
Male, age 61, both hemispheres
303.5
Lateral vestibular nucleus nTPM: 380.7
2311
Male, age 80, both hemispheres
382.8
2184
Male, age 76, both hemispheres
378.5
Locus coeruleus nTPM: 330.9
2014
Male, age 55, unknown
352.7
2317
Female, age 72, unknown
347.5
2123
Female, age 91, both hemispheres
339.5
2788
Male, age 74, unknown
336.0
2162
Male, age 80, both hemispheres
328.1
2720
Male, age 74, both hemispheres
326.3
1980
Male, age 76, both hemispheres
286.2
Medial parabrachial nucleus nTPM: 341.0
2170
Female, age 91, both hemispheres
384.0
2854
Male, age 80, both hemispheres
353.2
2156
Male, age 61, both hemispheres
338.9
2786
Male, age 76, both hemispheres
317.5
2463
Female, age 85, right hemisphere
311.6
Medial periolivary nuclei nTPM: 327.9
2171
Female, age 85, both hemispheres
364.9
2063
Male, age 76, both hemispheres
354.8
2791
Male, age 74, right hemisphere
330.1
2081
Male, age 80, both hemispheres
300.1
2458
Female, age 91, both hemispheres
289.6
Motor facial nucleus nTPM: 338.5
2697
Female, age 85, both hemispheres
359.5
2062
Male, age 76, both hemispheres
354.5
2365
Male, age 74, right hemisphere
341.9
2327
Male, age 80, both hemispheres
336.4
2795
Female, age 91, both hemispheres
329.8
2126
Male, age 61, both hemispheres
309.3
Motor trigeminal nucleus nTPM: 317.4
2335
Male, age 61, both hemispheres
338.3
2321
Female, age 91, both hemispheres
329.9
2309
Male, age 76, both hemispheres
312.7
2560
Male, age 74, both hemispheres
304.4
2079
Male, age 80, both hemispheres
301.5
Nuclei of the trapezoid body nTPM: 330.0
1983
Male, age 76, both hemispheres
377.4
2159
Male, age 61, both hemispheres
354.8
2735
Female, age 85, both hemispheres
335.7
2166
Male, age 80, both hemispheres
296.6
2368
Female, age 91, both hemispheres
285.6
Nucleus raphe magnus nTPM: 340.8
2160
Male, age 61, both hemispheres
396.5
2172
Female, age 85, both hemispheres
361.2
2051
Male, age 76, both hemispheres
350.3
2328
Male, age 80, both hemispheres
332.5
2455
Male, age 74, both hemispheres
306.0
2459
Female, age 91, both hemispheres
298.1
Paramedian reticular nucleus nTPM: 331.4
2050
Female, age 85, both hemispheres
368.8
2313
Male, age 61, both hemispheres
321.7
2052
Male, age 76, both hemispheres
321.6
2057
Male, age 80, both hemispheres
313.6
Pedunculopontine tegmental nucleus nTPM: 337.2
2338
Male, age 61, both hemispheres
363.1
2334
Male, age 80, both hemispheres
341.6
1921
Female, age 85, both hemispheres
307.0
Pontine nuclei nTPM: 354.6
1863
Male, age 55, unknown
432.4
2787
Female, age 85, both hemispheres
420.2
2319
Female, age 91, both hemispheres
345.1
2727
Male, age 61, right hemisphere
344.0
1968
Male, age 76, left hemisphere
341.6
2109
Female, age 72, unknown
330.3
2115
Male, age 80, left hemisphere
320.6
2454
Male, age 74, left hemisphere
302.7
Pontine raphe nucleus nTPM: 322.4
2122
Female, age 85, midline
322.7
2853
Male, age 76, midline
322.0
Posteroventral cochlear nucleus nTPM: 319.6
2341
Male, age 80, both hemispheres
335.3
2135
Female, age 91, both hemispheres
322.8
2752
Female, age 85, both hemispheres
321.7
2070
Male, age 76, both hemispheres
319.2
2371
Male, age 61, both hemispheres
299.0
Principal sensory trigeminal nucleus nTPM: 341.3
2158
Male, age 61, both hemispheres
374.6
2324
Male, age 76, both hemispheres
372.5
2367
Female, age 91, left hemisphere
310.0
2008
Male, age 80, left hemisphere
308.0
Reticular pontine nucleus, caudal nTPM: 331.9
2092
Male, age 76, both hemispheres
364.8
2332
Male, age 80, right hemisphere
349.1
2457
Female, age 91, both hemispheres
307.1
2559
Male, age 74, both hemispheres
306.8
Reticular pontine nucleus, oral nTPM: 331.3
1939
Male, age 80, both hemispheres
346.6
2012
Female, age 85, both hemispheres
331.3
2366
Female, age 91, both hemispheres
329.1
2361
Male, age 74, both hemispheres
326.1
2167
Male, age 76, both hemispheres
323.4
Reticulotegmental nucleus nTPM: 337.9
2333
Male, age 80, both hemispheres
351.2
2322
Female, age 91, both hemispheres
338.5
2325
Male, age 76, both hemispheres
334.3
2452
Male, age 74, both hemispheres
327.4
Spinal trigeminal nucleus, oral nTPM: 327.9
2164
Male, age 80, both hemispheres
362.3
2737
Female, age 85, both hemispheres
324.0
1978
Male, age 76, both hemispheres
297.4
Subcoeruleus area nTPM: 315.7
2323
Female, age 91, left hemisphere
344.6
2369
Female, age 85, left hemisphere
329.4
1958
Male, age 80, both hemispheres
325.5
2451
Male, age 74, both hemispheres
291.5
2089
Male, age 76, left hemisphere
287.7
Superior olive nTPM: 343.0
1875
Female, age 85, both hemispheres
369.9
2364
Male, age 74, right hemisphere
344.4
2020
Male, age 76, both hemispheres
339.2
2329
Male, age 80, right hemisphere
335.6
2561
Female, age 91, both hemispheres
325.9
Ventral periolivary nuclei nTPM: 332.6
2023
Male, age 76, both hemispheres
357.2
2130
Female, age 85, both hemispheres
330.4
2165
Male, age 80, both hemispheres
329.7
2794
Female, age 91, left hemisphere
313.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 327.4
2840
Female, age 85, both hemispheres
359.7
2359
Male, age 61, both hemispheres
339.8
2161
Male, age 80, both hemispheres
339.6
1959
Male, age 76, both hemispheres
333.3
2456
Female, age 91, both hemispheres
297.6
2449
Male, age 74, both hemispheres
294.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
