PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:43.6 nTPM
FANTOM5:79.0 Scaled Tags Per Million
Pig:52.6 nTPM
Mouse:73.6 nTPM
Allen mouse:3.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 43.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 35.7
2188 Female, age 91, both hemispheres 38.9
2090 Male, age 80, both hemispheres 36.7
2301 Female, age 85, both hemispheres 34.5
1984 Male, age 76, both hemispheres 32.7
Area postrema
nTPM: 38.8
2306 Male, age 80, both hemispheres 45.7
2799 Male, age 61, both hemispheres 36.3
2054 Male, age 76, both hemispheres 34.4
Dorsal cochlear nucleus
nTPM: 36.7
2187 Female, age 91, both hemispheres 42.1
2802 Male, age 74, right hemisphere 38.9
2378 Male, age 80, both hemispheres 36.9
2370 Male, age 61, both hemispheres 33.6
2058 Male, age 76, both hemispheres 31.8
Dorsal medullary reticular nucleus
nTPM: 34.9
2373 Male, age 61, both hemispheres 35.1
2040 Female, age 85, both hemispheres 34.9
2088 Male, age 76, both hemispheres 34.6
Dorsal motor vagal complex
nTPM: 34.8
2133 Female, age 91, both hemispheres 38.4
2643 Male, age 74, both hemispheres 37.8
2185 Male, age 76, both hemispheres 35.5
2807 Female, age 85, both hemispheres 35.4
2813 Female, age 72, unknown 35.3
2844 Male, age 55, unknown 34.7
2000 Male, age 74, unknown 31.1
2797 Male, age 61, both hemispheres 29.8
Dorsal tegmental nucleus
nTPM: 42.5
2358 Male, age 61, both hemispheres 51.3
2083 Male, age 80, both hemispheres 44.5
2326 Male, age 74, both hemispheres 37.1
1936 Male, age 76, left hemisphere 37.0
Dorsolateral tegmental area
nTPM: 39.0
2337 Male, age 61, both hemispheres 47.6
2654 Male, age 80, both hemispheres 40.4
2751 Female, age 85, both hemispheres 37.1
2141 Male, age 76, both hemispheres 35.9
2360 Male, age 74, both hemispheres 34.1
Gigantocellular reticular nuclei, medullary
nTPM: 35.5
2314 Male, age 61, both hemispheres 39.8
2387 Female, age 91, both hemispheres 36.7
2310 Male, age 80, both hemispheres 36.1
2462 Male, age 74, both hemispheres 35.0
1876 Female, age 85, both hemispheres 34.7
2022 Male, age 76, right hemisphere 30.5
Gigantocellular reticular nuclei, pars
nTPM: 36.5
2336 Male, age 61, both hemispheres 38.9
2330 Male, age 80, both hemispheres 38.7
2706 Male, age 80, both hemispheres 38.3
2084 Female, age 85, both hemispheres 37.2
2168 Male, age 76, both hemispheres 29.6
Inferior olive
nTPM: 40.9
2563 Male, age 74, both hemispheres 43.6
2628 Female, age 91, both hemispheres 42.7
2178 Male, age 61, both hemispheres 41.9
2085 Female, age 85, both hemispheres 39.0
2379 Male, age 80, both hemispheres 37.6
Kolliker-Fuse nucleus
nTPM: 41.6
2315 Male, age 76, right hemisphere 45.7
2793 Female, age 91, left hemisphere 40.9
2163 Male, age 80, both hemispheres 38.2
Lateral lemniscal nuclei
nTPM: 32.7
2453 Male, age 74, right hemisphere 36.5
2320 Female, age 91, left hemisphere 36.4
2746 Female, age 85, left hemisphere 34.1
2169 Male, age 76, both hemispheres 32.0
2036 Male, age 80, both hemispheres 24.4
Lateral medullary reticular nucleus
nTPM: 39.9
2305 Male, age 74, both hemispheres 44.0
2374 Male, age 61, both hemispheres 42.9
2852 Male, age 80, both hemispheres 41.7
2190 Female, age 85, both hemispheres 38.7
2804 Female, age 91, both hemispheres 38.3
2044 Male, age 76, both hemispheres 33.6
Lateral parabrachial nucleus
nTPM: 38.8
2792 Male, age 76, both hemispheres 45.8
2013 Male, age 80, both hemispheres 37.8
2790 Male, age 61, both hemispheres 36.7
2139 Female, age 85, right hemisphere 34.7
Lateral vestibular nucleus
nTPM: 36.2
2311 Male, age 80, both hemispheres 39.0
2184 Male, age 76, both hemispheres 33.4
Locus coeruleus
nTPM: 36.2
2123 Female, age 91, both hemispheres 40.7
1980 Male, age 76, both hemispheres 36.3
2162 Male, age 80, both hemispheres 36.3
2014 Male, age 55, unknown 35.9
2720 Male, age 74, both hemispheres 35.7
2317 Female, age 72, unknown 34.9
2788 Male, age 74, unknown 33.8
Medial olivary nucleus
nTPM: 42.2
1943 Male, age 61, both hemispheres 45.6
2851 Male, age 80, both hemispheres 45.2
1962 Male, age 76, both hemispheres 41.7
2138 Female, age 91, both hemispheres 36.3
Medial parabrachial nucleus
nTPM: 38.8
2156 Male, age 61, both hemispheres 42.8
2170 Female, age 91, both hemispheres 40.7
2854 Male, age 80, both hemispheres 39.1
2786 Male, age 76, both hemispheres 36.6
2463 Female, age 85, right hemisphere 34.5
Medial periolivary nuclei
nTPM: 34.0
2458 Female, age 91, both hemispheres 37.4
2081 Male, age 80, both hemispheres 37.2
2791 Male, age 74, right hemisphere 35.3
2171 Female, age 85, both hemispheres 30.2
2063 Male, age 76, both hemispheres 29.9
Medial vestibular nucleus
nTPM: 37.5
2624 Male, age 61, both hemispheres 44.4
2803 Female, age 91, both hemispheres 37.7
2093 Male, age 80, both hemispheres 36.8
2801 Male, age 74, both hemispheres 36.4
2134 Male, age 76, both hemispheres 35.5
2743 Female, age 85, both hemispheres 34.5
Motor facial nucleus
nTPM: 35.0
2126 Male, age 61, both hemispheres 37.7
2697 Female, age 85, both hemispheres 37.7
2365 Male, age 74, right hemisphere 36.7
2795 Female, age 91, both hemispheres 36.0
2327 Male, age 80, both hemispheres 32.0
2062 Male, age 76, both hemispheres 29.6
Motor hypoglossal nucleus
nTPM: 36.9
2182 Male, age 80, both hemispheres 39.7
2125 Female, age 91, both hemispheres 38.9
2461 Male, age 61, both hemispheres 37.1
2132 Female, age 85, both hemispheres 35.9
2277 Male, age 76, both hemispheres 32.9
Motor trigeminal nucleus
nTPM: 36.7
2321 Female, age 91, both hemispheres 40.6
2309 Male, age 76, both hemispheres 36.7
2335 Male, age 61, both hemispheres 36.7
2560 Male, age 74, both hemispheres 36.3
2079 Male, age 80, both hemispheres 33.5
Nuclei of the trapezoid body
nTPM: 32.0
2166 Male, age 80, both hemispheres 34.3
1983 Male, age 76, both hemispheres 33.8
2159 Male, age 61, both hemispheres 32.2
2368 Female, age 91, both hemispheres 32.0
2735 Female, age 85, both hemispheres 27.7
Nucleus ambiguus
nTPM: 38.2
2071 Male, age 76, both hemispheres 38.8
2096 Female, age 85, both hemispheres 37.5
Nucleus cuneatus
nTPM: 35.4
2381 Male, age 80, both hemispheres 38.4
2808 Female, age 85, both hemispheres 37.9
2380 Male, age 80, both hemispheres 37.4
2564 Male, age 74, both hemispheres 36.9
2805 Female, age 91, both hemispheres 35.7
2376 Male, age 61, both hemispheres 34.5
2131 Male, age 76, both hemispheres 33.6
2100 Male, age 76, both hemispheres 32.6
2562 Male, age 61, both hemispheres 31.5
Nucleus gracilis
nTPM: 39.4
2627 Male, age 74, both hemispheres 42.0
2382 Male, age 80, both hemispheres 39.1
2299 Female, age 85, both hemispheres 37.0
Nucleus raphe magnus
nTPM: 34.2
2459 Female, age 91, both hemispheres 36.5
2328 Male, age 80, both hemispheres 35.0
2455 Male, age 74, both hemispheres 34.6
2160 Male, age 61, both hemispheres 34.5
2051 Male, age 76, both hemispheres 32.9
2172 Female, age 85, both hemispheres 31.5
Nucleus raphe obscurus
nTPM: 38.4
2142 Male, age 76, midline 43.2
2845 Female, age 85, midline 36.5
2800 Male, age 61, midline 35.6
Nucleus raphe pallidus
nTPM: 43.6
1924 Male, age 61, midline 48.4
2183 Male, age 80, midline 42.3
2145 Male, age 76, midline 40.0
Nucleus tractus solitarii
nTPM: 33.2
2191 Female, age 85, both hemispheres 35.6
2307 Male, age 80, both hemispheres 32.7
2144 Female, age 91, right hemisphere 32.2
2656 Male, age 76, both hemispheres 32.1
Paramedian reticular nucleus
nTPM: 35.3
2052 Male, age 76, both hemispheres 39.5
2313 Male, age 61, both hemispheres 34.9
2050 Female, age 85, both hemispheres 34.3
2057 Male, age 80, both hemispheres 32.5
Parvicellular reticular nuclei
nTPM: 36.4
2119 Male, age 80, both hemispheres 38.9
2095 Male, age 76, both hemispheres 35.6
2558 Male, age 74, both hemispheres 34.7
Parvicellular reticular nuclei, medullary
nTPM: 36.6
2189 Female, age 91, both hemispheres 39.0
2091 Female, age 85, both hemispheres 36.8
2181 Male, age 80, left hemisphere 33.9
Pedunculopontine tegmental nucleus
nTPM: 37.2
2334 Male, age 80, both hemispheres 41.1
2338 Male, age 61, both hemispheres 36.7
1921 Female, age 85, both hemispheres 33.9
Peritrigeminal nucleus
nTPM: 39.0
2136 Male, age 76, both hemispheres 40.0
2067 Female, age 85, both hemispheres 39.3
2179 Male, age 61, both hemispheres 37.6
Pontine nuclei
nTPM: 36.9
2454 Male, age 74, left hemisphere 40.9
2115 Male, age 80, left hemisphere 38.4
2109 Female, age 72, unknown 37.3
2319 Female, age 91, both hemispheres 37.3
1863 Male, age 55, unknown 37.1
2787 Female, age 85, both hemispheres 36.6
1968 Male, age 76, left hemisphere 33.9
2727 Male, age 61, right hemisphere 33.5
Pontine raphe nucleus
nTPM: 30.7
2853 Male, age 76, midline 33.7
2122 Female, age 85, midline 27.7
Posteroventral cochlear nucleus
nTPM: 38.4
2341 Male, age 80, both hemispheres 44.5
2135 Female, age 91, both hemispheres 43.2
2070 Male, age 76, both hemispheres 38.2
2371 Male, age 61, both hemispheres 34.9
2752 Female, age 85, both hemispheres 31.5
Prepositus hypoglossal nucleus
nTPM: 35.7
2086 Male, age 80, both hemispheres 38.9
2855 Female, age 85, right hemisphere 32.5
Principal sensory trigeminal nucleus
nTPM: 34.1
2367 Female, age 91, left hemisphere 37.0
2324 Male, age 76, both hemispheres 35.6
2158 Male, age 61, both hemispheres 32.8
2008 Male, age 80, left hemisphere 30.9
Reticular pontine nucleus, caudal
nTPM: 37.9
2457 Female, age 91, both hemispheres 43.8
2559 Male, age 74, both hemispheres 37.0
2092 Male, age 76, both hemispheres 36.6
2332 Male, age 80, right hemisphere 34.3
Reticular pontine nucleus, oral
nTPM: 36.7
1939 Male, age 80, both hemispheres 40.0
2361 Male, age 74, both hemispheres 37.3
2366 Female, age 91, both hemispheres 37.1
2167 Male, age 76, both hemispheres 36.3
2012 Female, age 85, both hemispheres 32.7
Reticulotegmental nucleus
nTPM: 37.5
2322 Female, age 91, both hemispheres 40.3
2452 Male, age 74, both hemispheres 39.5
2333 Male, age 80, both hemispheres 38.4
2325 Male, age 76, both hemispheres 31.9
Spinal trigeminal nucleus, caudal
nTPM: 36.6
2642 Male, age 74, both hemispheres 38.7
2308 Male, age 80, both hemispheres 37.9
2390 Female, age 91, both hemispheres 36.0
2312 Male, age 61, both hemispheres 35.7
2447 Male, age 76, both hemispheres 34.6
Spinal trigeminal nucleus, interpolar
nTPM: 34.2
2033 Male, age 80, both hemispheres 37.6
2625 Male, age 61, both hemispheres 36.9
2389 Female, age 91, both hemispheres 36.1
2386 Female, age 85, both hemispheres 32.2
2066 Male, age 76, right hemisphere 28.5
Spinal trigeminal nucleus, oral
nTPM: 36.1
2164 Male, age 80, both hemispheres 41.1
1978 Male, age 76, both hemispheres 35.1
2737 Female, age 85, both hemispheres 32.2
Spinal vestibular nucleus
nTPM: 37.4
2796 Male, age 61, both hemispheres 43.7
2780 Male, age 80, both hemispheres 39.3
2748 Male, age 76, both hemispheres 38.8
2186 Female, age 91, both hemispheres 36.1
2384 Male, age 74, both hemispheres 34.6
2806 Female, age 85, both hemispheres 31.9
Subcoeruleus area
nTPM: 35.9
2323 Female, age 91, left hemisphere 39.3
2369 Female, age 85, left hemisphere 37.9
2451 Male, age 74, both hemispheres 36.6
1958 Male, age 80, both hemispheres 35.4
2089 Male, age 76, left hemisphere 30.1
Superior olive
nTPM: 34.8
2364 Male, age 74, right hemisphere 38.0
2020 Male, age 76, both hemispheres 35.4
2329 Male, age 80, right hemisphere 34.5
1875 Female, age 85, both hemispheres 33.1
2561 Female, age 91, both hemispheres 33.1
Superior vestibular nucleus
nTPM: 39.0
2061 Male, age 76, both hemispheres 41.1
2383 Male, age 74, both hemispheres 39.8
2015 Male, age 80, both hemispheres 36.2
Ventral medullary reticular nucleus
nTPM: 36.3
2060 Male, age 76, both hemispheres 38.9
2372 Male, age 61, both hemispheres 33.7
Ventral periolivary nuclei
nTPM: 32.3
2794 Female, age 91, left hemisphere 34.8
2165 Male, age 80, both hemispheres 34.3
2023 Male, age 76, both hemispheres 33.6
2130 Female, age 85, both hemispheres 26.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 38.8
2180 Male, age 61, both hemispheres 43.5
2118 Male, age 80, both hemispheres 42.1
2302 Female, age 91, both hemispheres 36.8
1986 Male, age 76, both hemispheres 36.4
2741 Female, age 85, both hemispheres 35.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 36.3
2840 Female, age 85, both hemispheres 39.6
2456 Female, age 91, both hemispheres 37.5
1959 Male, age 76, both hemispheres 37.1
2161 Male, age 80, both hemispheres 36.9
2449 Male, age 74, both hemispheres 36.5
2359 Male, age 61, both hemispheres 30.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 73.0
FF:10165-103B3 76 years, female 73.3
FF:10182-103D2 60 years, female 72.6
Medulla oblongata
Scaled Tags Per Million: 79.0
FF:10038-101F2 18-64 years, mixed 80.7
FF:10174-103C3 60 years, female 78.3
FF:10155-103A2 76 years, female 77.9
Pons
Scaled Tags Per Million: 58.7
FF:10033-101E6 18-54 years, mixed 58.7

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 52.6
Pig sample Sample description nTPM
44.046.449.043.250.305101520253035404550
 		Medulla oblongata
nTPM: 46.6
Samples: 4

Max nTPM: 50.3
Min nTPM: 43.2
Sample A Female 44.3
Sample B Female 43.2
Sample C Male 50.3
Sample D Male 48.5
51.454.255.353.757.20510152025303540455055
 		Pons
nTPM: 52.6
Samples: 4

Max nTPM: 57.2
Min nTPM: 44.6
Sample A Female 54.7
Sample B Female 44.6
Sample C Male 53.7
Sample D Male 57.2

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 73.6
Mouse sample Sample description nTPM
73.173.774.272.874.4010203040506070
 		Pons and medulla
nTPM: 73.6
Samples: 4

Max nTPM: 74.4
Min nTPM: 72.8
Sample A Male 73.2
Sample B Male 74.4
Sample C Female 72.8
Sample D Female 74.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.8
73716596 Antisense, RP_051206_03_D10, Mouse strain C57BL/6J (56 days, male) 3.8
Pons
Expression energy: 3.3
73716596 Antisense, RP_051206_03_D10, Mouse strain C57BL/6J (56 days, male) 3.3

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