HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:474.2 nTPM
HPA Brain:62.2 nTPM
GTEx:474.2 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:1607.7 nTPM
Mouse:201.1 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043961
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.2
Sample id Sample description nTPM
Hippocampus
nTPM: 62.2
2529 Female, age 94, left hemisphere 86.8
2621 Female, age 67, right hemisphere 66.1
2148 Female, age 91, left hemisphere 56.5
1911 Female, age 85, right hemisphere 55.6
1898 Male, age 80, left hemisphere 54.3
1855 Male, age 76, left hemisphere 53.7
Dentate gyrus
nTPM: 61.0
2530 Female, age 94, left hemisphere 100.6
2246 Female, age 85, both hemispheres 63.8
2531 Female, age 67, both hemispheres 61.8
1927 Female, age 91, both hemispheres 52.7
2010 Male, age 76, both hemispheres 49.9
2528 Male, age 74, both hemispheres 37.4
Entorhinal gyrus
nTPM: 57.3
2686 Male, age 75, right hemisphere 80.7
2117 Female, age 91, right hemisphere 61.6
1938 Female, age 85, left hemisphere 56.6
1787 Male, age 76, left hemisphere 55.9
2764 Male, age 80, right hemisphere 44.8
2613 Female, age 94, left hemisphere 44.4
Hippocampus, CA1
nTPM: 49.8
2527 Male, age 74, both hemispheres 63.7
2045 Male, age 76, both hemispheres 57.4
1873 Female, age 85, both hemispheres 49.4
2082 Female, age 91, right hemisphere 40.4
2749 Male, age 80, left hemisphere 38.3
Hippocampus, CA2
nTPM: 49.5
1892 Male, age 76, both hemispheres 66.0
2437 Female, age 94, left hemisphere 63.5
1940 Female, age 85, left hemisphere 57.5
2113 Female, age 91, right hemisphere 40.4
2249 Male, age 74, both hemispheres 36.7
1963 Male, age 80, left hemisphere 32.8
Hippocampus, CA3
nTPM: 48.6
2861 Female, age 67, both hemispheres 65.8
1867 Male, age 76, both hemispheres 58.6
1891 Female, age 85, both hemispheres 52.6
2620 Female, age 94, left hemisphere 42.7
2436 Male, age 74, both hemispheres 37.6
2137 Male, age 80, left hemisphere 34.2
Parahippocampal cortex
nTPM: 59.3
2245 Female, age 91, both hemispheres 110.4
2692 Male, age 74, both hemispheres 67.1
2532 Female, age 72, left hemisphere 63.5
2250 Female, age 67, right hemisphere 61.4
1933 Female, age 85, both hemispheres 57.2
2622 Female, age 67, right hemisphere 49.0
1990 Female, age 91, right hemisphere 48.0
2018 Male, age 76, both hemispheres 47.3
1850 Male, age 80, both hemispheres 45.7
2693 Female, age 94, both hemispheres 43.5
Perirhinal gyrus
nTPM: 50.6
2848 Male, age 76, right hemisphere 63.0
1794 Male, age 80, right hemisphere 53.2
1841 Female, age 85, right hemisphere 51.2
2521 Female, age 94, right hemisphere 44.1
1847 Female, age 91, left hemisphere 41.2
Subiculum
nTPM: 55.6
2438 Female, age 94, left hemisphere 74.1
1901 Male, age 80, both hemispheres 62.3
2042 Male, age 76, both hemispheres 55.5
1977 Female, age 85, both hemispheres 52.6
2619 Male, age 74, both hemispheres 48.6
2729 Female, age 91, right hemisphere 40.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 474.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 474.2
Samples: 197

Max nTPM: 1696.7
Min nTPM: 116.2
Std nTPM: 276.6
Median nTPM: 422.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1696.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1395.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1247.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1219.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1210.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 1142.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 1137.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1131.8
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 1118.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 1103.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1074.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1607.7
Pig sample Sample description nTPM
Subiculum
nTPM: 1284.1
Samples: 4

Max nTPM: 1768.8
Min nTPM: 1003.3
Sample A Female 1768.8
Sample B Female 1202.2
Sample C Male 1003.3
Sample D Male 1162.1
Dorsal hippocampus
nTPM: 1607.7
Samples: 4

Max nTPM: 2100.9
Min nTPM: 1061.6
Sample A Female 2100.9
Sample B Female 1507.1
Sample C Male 1761.2
Sample D Male 1061.6
Entorhinal cortex
nTPM: 1329.1
Samples: 4

Max nTPM: 1727.2
Min nTPM: 936.7
Sample A Female 1141.2
Sample B Female 1727.2
Sample C Male 1511.4
Sample D Male 936.7
Ventral hippocampus
nTPM: 1394.7
Samples: 4

Max nTPM: 1516.0
Min nTPM: 1227.5
Sample A Female 1465.5
Sample B Female 1227.5
Sample C Male 1516.0
Sample D Male 1369.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 201.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 201.1
Samples: 4

Max nTPM: 209.2
Min nTPM: 192.9
Sample A Male 203.2
Sample B Male 192.9
Sample C Female 209.2
Sample D Female 199.1
Hippocampal formation
nTPM: 197.0
Samples: 4

Max nTPM: 238.8
Min nTPM: 156.5
Sample A Male 208.9
Sample B Male 183.8
Sample C Female 156.5
Sample D Female 238.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
68191282 Antisense, RP_041123_02_C06, Mouse strain C57BL/6J (56 days, male) 10.6

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