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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4358.6
nTPM
Monaco:
642.8
nTPM
Schmiedel:
762.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4358.6
HPA sample
nTPM
gdT-cell nTPM: 2471.4
Samples: 6
Max nTPM: 3260.9
Min nTPM: 1745.8
P10809_1007
3260.9
P10809_1022
2098.5
P10809_1041
2654.6
P10809_1060
1745.8
P10809_1077
2570.4
P10809_1098
2498.0
MAIT T-cell nTPM: 3388.6
Samples: 6
Max nTPM: 4089.0
Min nTPM: 2835.0
P10809_1006
3326.9
P10809_1024
3192.3
P10809_1043
3679.7
P10809_1062
3208.8
P10809_1083
2835.0
P10809_1097
4089.0
Memory CD4 T-cell nTPM: 3815.5
Samples: 6
Max nTPM: 4604.7
Min nTPM: 3003.6
P10809_1014
4187.3
P10809_1026
4604.7
P10809_1045
4005.3
P10809_1064
3003.6
P10809_1086
3085.0
P10809_1113
4007.1
Memory CD8 T-cell nTPM: 3080.2
Samples: 5
Max nTPM: 3462.2
Min nTPM: 2583.2
P10809_1012
3296.6
P10809_1027
3164.1
P10809_1046
3462.2
P10809_1065
2583.2
P10809_1111
2895.1
Naive CD4 T-cell nTPM: 4358.6
Samples: 6
Max nTPM: 5280.4
Min nTPM: 3432.7
P10809_1015
5118.8
P10809_1030
5280.4
P10809_1049
3725.7
P10809_1068
4233.1
P10809_1085
3432.7
P10809_1112
4360.9
Naive CD8 T-cell nTPM: 4022.0
Samples: 6
Max nTPM: 6474.4
Min nTPM: 2635.4
P10809_1016
6474.4
P10809_1031
4234.9
P10809_1050
3587.8
P10809_1069
3359.5
P10809_1087
2635.4
P10809_1110
3840.2
T-reg nTPM: 3022.4
Samples: 6
Max nTPM: 3392.0
Min nTPM: 2738.8
P10809_1018
2881.7
P10809_1037
2988.7
P10809_1056
2738.8
P10809_1075
3260.6
P10809_1094
3392.0
P10809_1106
2872.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
642.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 494.4
Samples: 4
Max nTPM: 902.4
Min nTPM: 200.5
RHH5202_R3573
200.5
RHH5230_R3602
649.3
RHH5259_R3631
902.4
RHH5288_R3660
225.5
Effector memory CD8 T-cell nTPM: 228.4
Samples: 4
Max nTPM: 404.2
Min nTPM: 139.0
RHH5203_R3574
182.4
RHH5231_R3603
188.1
RHH5260_R3632
404.2
RHH5289_R3661
139.0
MAIT T-cell nTPM: 351.5
Samples: 4
Max nTPM: 503.2
Min nTPM: 225.2
RHH5233_R3605
225.2
RHH5205_R3576
503.2
RHH5262_R3634
446.2
RHH5297_R3663
231.5
Memory CD4 T-cell TFH nTPM: 224.3
Samples: 4
Max nTPM: 271.0
Min nTPM: 146.3
RHH5300_R3666
146.3
RHH5236_R3608
271.0
RHH5265_R3637
235.2
RHH5208_R3579
244.8
Memory CD4 T-cell Th1 nTPM: 613.1
Samples: 4
Max nTPM: 1290.9
Min nTPM: 202.8
RHH5210_R3581
202.8
RHH5302_R3668
284.4
RHH5238_R3610
1290.9
RHH5267_R3639
674.3
Memory CD4 T-cell Th1/Th17 nTPM: 484.4
Samples: 4
Max nTPM: 848.7
Min nTPM: 167.0
RHH5303_R3669
180.4
RHH5211_R3582
167.0
RHH5239_R3611
848.7
RHH5268_R3640
741.4
Memory CD4 T-cell Th17 nTPM: 496.7
Samples: 4
Max nTPM: 611.6
Min nTPM: 282.5
RHH5304_R3670
585.8
RHH5212_R3583
282.5
RHH5240_R3612
611.6
RHH5269_R3641
506.7
Memory CD4 T-cell Th2 nTPM: 489.6
Samples: 4
Max nTPM: 688.3
Min nTPM: 346.0
RHH5305_R3671
688.3
RHH5213_R3584
346.0
RHH5241_R3613
462.1
RHH5270_R3642
462.1
Naive CD4 T-cell nTPM: 642.8
Samples: 4
Max nTPM: 807.6
Min nTPM: 514.0
RHH5306_R3672
650.2
RHH5214_R3585
599.3
RHH5242_R3614
514.0
RHH5271_R3643
807.6
Naive CD8 T-cell nTPM: 627.6
Samples: 4
Max nTPM: 1253.3
Min nTPM: 324.4
RHH5201_R3572
390.2
RHH5229_R3601
1253.3
RHH5258_R3630
324.4
RHH5287_R3659
542.5
Non-Vd2 gdTCR nTPM: 234.6
Samples: 4
Max nTPM: 482.3
Min nTPM: 105.3
RHH5235_R3607
482.3
RHH5264_R3636
147.5
RHH5207_R3578
203.1
RHH5299_R3665
105.3
T-reg nTPM: 374.4
Samples: 4
Max nTPM: 644.1
Min nTPM: 219.7
RHH5301_R3667
225.9
RHH5237_R3609
219.7
RHH5266_R3638
644.1
RHH5209_R3580
408.0
Terminal effector memory CD4 T-cell nTPM: 359.7
Samples: 2
Max nTPM: 492.1
Min nTPM: 227.3
RHH5243_R3615
492.1
RHH5272_R3644
227.3
Terminal effector memory CD8 T-cell nTPM: 277.8
Samples: 4
Max nTPM: 472.0
Min nTPM: 148.3
RHH5232_R3604
158.5
RHH5204_R3575
332.2
RHH5261_R3633
472.0
RHH5296_R3662
148.3
Vd2 gdTCR nTPM: 559.9
Samples: 4
Max nTPM: 965.2
Min nTPM: 274.5
RHH5234_R3606
376.0
RHH5206_R3577
965.2
RHH5263_R3635
623.8
RHH5298_R3664
274.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.