HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:153.8 nTPM
HPA Brain:59.6 nTPM
GTEx:153.8 nTPM
FANTOM5:36.8 Scaled Tags Per Million
Pig:44.9 nTPM
Mouse:78.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.6
Sample id Sample description nTPM
Hippocampus
nTPM: 56.6
1898 Male, age 80, left hemisphere 67.5
2529 Female, age 94, left hemisphere 64.6
1911 Female, age 85, right hemisphere 56.3
2148 Female, age 91, left hemisphere 54.8
2621 Female, age 67, right hemisphere 53.3
1855 Male, age 76, left hemisphere 43.0
Dentate gyrus
nTPM: 55.1
2530 Female, age 94, left hemisphere 78.9
2010 Male, age 76, both hemispheres 57.7
2528 Male, age 74, both hemispheres 56.1
2246 Female, age 85, both hemispheres 47.5
2531 Female, age 67, both hemispheres 45.2
1927 Female, age 91, both hemispheres 44.9
Entorhinal gyrus
nTPM: 59.6
2117 Female, age 91, right hemisphere 74.2
2764 Male, age 80, right hemisphere 67.8
1938 Female, age 85, left hemisphere 57.0
2613 Female, age 94, left hemisphere 53.7
1787 Male, age 76, left hemisphere 52.9
2686 Male, age 75, right hemisphere 51.7
Hippocampus, CA1
nTPM: 52.3
2749 Male, age 80, left hemisphere 68.9
2527 Male, age 74, both hemispheres 62.1
1873 Female, age 85, both hemispheres 46.9
2082 Female, age 91, right hemisphere 44.5
2045 Male, age 76, both hemispheres 39.1
Hippocampus, CA2
nTPM: 57.9
1963 Male, age 80, left hemisphere 80.8
2437 Female, age 94, left hemisphere 63.8
2249 Male, age 74, both hemispheres 58.8
1892 Male, age 76, both hemispheres 52.3
2113 Female, age 91, right hemisphere 47.8
1940 Female, age 85, left hemisphere 43.9
Hippocampus, CA3
nTPM: 51.9
2436 Male, age 74, both hemispheres 61.1
2137 Male, age 80, left hemisphere 55.5
2861 Female, age 67, both hemispheres 55.5
1867 Male, age 76, both hemispheres 52.0
1891 Female, age 85, both hemispheres 51.3
2620 Female, age 94, left hemisphere 36.3
Parahippocampal cortex
nTPM: 50.3
2245 Female, age 91, both hemispheres 58.0
1933 Female, age 85, both hemispheres 54.3
2018 Male, age 76, both hemispheres 54.2
2692 Male, age 74, both hemispheres 54.2
1990 Female, age 91, right hemisphere 53.8
2532 Female, age 72, left hemisphere 52.0
2250 Female, age 67, right hemisphere 48.0
2622 Female, age 67, right hemisphere 48.0
1850 Male, age 80, both hemispheres 43.5
2693 Female, age 94, both hemispheres 37.4
Perirhinal gyrus
nTPM: 46.1
1794 Male, age 80, right hemisphere 50.3
2521 Female, age 94, right hemisphere 50.0
1847 Female, age 91, left hemisphere 49.3
2848 Male, age 76, right hemisphere 43.1
1841 Female, age 85, right hemisphere 37.9
Subiculum
nTPM: 55.4
1977 Female, age 85, both hemispheres 58.2
1901 Male, age 80, both hemispheres 57.6
2042 Male, age 76, both hemispheres 56.6
2619 Male, age 74, both hemispheres 54.7
2729 Female, age 91, right hemisphere 54.4
2438 Female, age 94, left hemisphere 50.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 153.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 153.8
Samples: 197

Max nTPM: 332.1
Min nTPM: 40.8
Std nTPM: 47.6
Median nTPM: 148.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 332.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 303.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 279.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 275.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 256.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 254.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 250.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 246.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 244.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 238.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 232.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.8
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.9
Pig sample Sample description nTPM
Subiculum
nTPM: 37.5
Samples: 4

Max nTPM: 53.9
Min nTPM: 27.8
Sample A Female 53.9
Sample B Female 35.5
Sample C Male 32.7
Sample D Male 27.8
Dorsal hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 65.8
Min nTPM: 24.9
Sample A Female 65.8
Sample B Female 41.1
Sample C Male 47.8
Sample D Male 24.9
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 49.6
Min nTPM: 25.6
Sample A Female 31.2
Sample B Female 49.3
Sample C Male 49.6
Sample D Male 25.6
Ventral hippocampus
nTPM: 41.4
Samples: 4

Max nTPM: 51.0
Min nTPM: 32.7
Sample A Female 44.3
Sample B Female 37.7
Sample C Male 51.0
Sample D Male 32.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.2
Samples: 4

Max nTPM: 75.9
Min nTPM: 54.0
Sample A Male 65.7
Sample B Male 75.9
Sample C Female 73.1
Sample D Female 54.0
Hippocampal formation
nTPM: 78.2
Samples: 4

Max nTPM: 90.9
Min nTPM: 70.6
Sample A Male 79.9
Sample B Male 71.5
Sample C Female 70.6
Sample D Female 90.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71492790 Antisense, RP_050913_01_E09, Mouse strain C57BL/6J (56 days, male) 0.2

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