HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:469.1 nTPM
HPA Brain:163.2 nTPM
GTEx:469.1 nTPM
FANTOM5:147.9 Scaled Tags Per Million
Pig:506.0 nTPM
Mouse:524.1 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 163.2
Sample id Sample description nTPM
Hippocampus
nTPM: 145.2
1898 Male, age 80, left hemisphere 208.9
1911 Female, age 85, right hemisphere 149.0
2529 Female, age 94, left hemisphere 144.4
2621 Female, age 67, right hemisphere 127.3
1855 Male, age 76, left hemisphere 124.1
2148 Female, age 91, left hemisphere 117.7
Dentate gyrus
nTPM: 139.5
1927 Female, age 91, both hemispheres 182.8
2010 Male, age 76, both hemispheres 174.3
2246 Female, age 85, both hemispheres 133.5
2530 Female, age 94, left hemisphere 129.8
2528 Male, age 74, both hemispheres 113.7
2531 Female, age 67, both hemispheres 103.2
Entorhinal gyrus
nTPM: 125.4
1938 Female, age 85, left hemisphere 161.0
1787 Male, age 76, left hemisphere 148.3
2764 Male, age 80, right hemisphere 148.1
2117 Female, age 91, right hemisphere 132.4
2686 Male, age 75, right hemisphere 86.1
2613 Female, age 94, left hemisphere 76.3
Hippocampus, CA1
nTPM: 163.2
2749 Male, age 80, left hemisphere 220.7
1873 Female, age 85, both hemispheres 163.0
2527 Male, age 74, both hemispheres 154.7
2045 Male, age 76, both hemispheres 151.6
2082 Female, age 91, right hemisphere 126.2
Hippocampus, CA2
nTPM: 155.6
1892 Male, age 76, both hemispheres 187.7
1963 Male, age 80, left hemisphere 182.3
2249 Male, age 74, both hemispheres 181.8
1940 Female, age 85, left hemisphere 139.8
2113 Female, age 91, right hemisphere 124.3
2437 Female, age 94, left hemisphere 117.6
Hippocampus, CA3
nTPM: 140.9
2436 Male, age 74, both hemispheres 198.1
1867 Male, age 76, both hemispheres 165.5
2137 Male, age 80, left hemisphere 155.0
1891 Female, age 85, both hemispheres 153.5
2620 Female, age 94, left hemisphere 96.5
2861 Female, age 67, both hemispheres 77.2
Parahippocampal cortex
nTPM: 126.3
1850 Male, age 80, both hemispheres 161.8
1933 Female, age 85, both hemispheres 155.4
2250 Female, age 67, right hemisphere 153.9
1990 Female, age 91, right hemisphere 148.4
2018 Male, age 76, both hemispheres 144.0
2245 Female, age 91, both hemispheres 130.9
2532 Female, age 72, left hemisphere 115.1
2693 Female, age 94, both hemispheres 93.4
2622 Female, age 67, right hemisphere 83.0
2692 Male, age 74, both hemispheres 77.0
Perirhinal gyrus
nTPM: 158.6
1847 Female, age 91, left hemisphere 196.7
1794 Male, age 80, right hemisphere 174.9
1841 Female, age 85, right hemisphere 168.9
2521 Female, age 94, right hemisphere 129.6
2848 Male, age 76, right hemisphere 122.9
Subiculum
nTPM: 127.9
1901 Male, age 80, both hemispheres 161.5
1977 Female, age 85, both hemispheres 158.4
2042 Male, age 76, both hemispheres 128.8
2729 Female, age 91, right hemisphere 113.2
2619 Male, age 74, both hemispheres 109.9
2438 Female, age 94, left hemisphere 95.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 469.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 469.1
Samples: 197

Max nTPM: 1349.4
Min nTPM: 235.2
Std nTPM: 142.7
Median nTPM: 444.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1349.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 942.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 929.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 929.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 887.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 863.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 835.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 818.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 794.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 712.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 698.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.9
FF:10169-103B7 60 years, female 201.4
FF:10153-102I9 76 years, female 94.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 506.0
Pig sample Sample description nTPM
Subiculum
nTPM: 393.4
Samples: 4

Max nTPM: 545.8
Min nTPM: 331.9
Sample A Female 545.8
Sample B Female 354.6
Sample C Male 331.9
Sample D Male 341.4
Dorsal hippocampus
nTPM: 506.0
Samples: 4

Max nTPM: 685.1
Min nTPM: 417.0
Sample A Female 685.1
Sample B Female 417.0
Sample C Male 466.5
Sample D Male 455.4
Entorhinal cortex
nTPM: 408.5
Samples: 4

Max nTPM: 477.4
Min nTPM: 344.3
Sample A Female 477.4
Sample B Female 424.3
Sample C Male 388.1
Sample D Male 344.3
Ventral hippocampus
nTPM: 413.5
Samples: 4

Max nTPM: 496.2
Min nTPM: 278.1
Sample A Female 419.8
Sample B Female 278.1
Sample C Male 459.9
Sample D Male 496.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 524.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 524.1
Samples: 4

Max nTPM: 559.4
Min nTPM: 485.3
Sample A Male 485.3
Sample B Male 512.1
Sample C Female 559.4
Sample D Female 539.7
Hippocampal formation
nTPM: 514.1
Samples: 4

Max nTPM: 591.9
Min nTPM: 440.1
Sample A Male 591.9
Sample B Male 440.1
Sample C Female 529.5
Sample D Female 494.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
68744600 Antisense, RP_050208_01_C02, Mouse strain C57BL/6J (56 days, male) 4.8

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