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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
159.5
nTPM
FANTOM5:
122.7
Scaled Tags Per Million
Pig:
514.3
nTPM
Allen mouse:
3.8
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
159.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 122.6
2188
Female, age 91, both hemispheres
137.6
2090
Male, age 80, both hemispheres
135.1
1984
Male, age 76, both hemispheres
115.9
2301
Female, age 85, both hemispheres
101.6
Dorsal cochlear nucleus nTPM: 123.6
2802
Male, age 74, right hemisphere
161.4
2187
Female, age 91, both hemispheres
138.9
2370
Male, age 61, both hemispheres
117.6
2058
Male, age 76, both hemispheres
104.2
2378
Male, age 80, both hemispheres
95.7
Dorsal tegmental nucleus nTPM: 139.9
2326
Male, age 74, both hemispheres
171.7
2083
Male, age 80, both hemispheres
153.1
1936
Male, age 76, left hemisphere
131.0
2358
Male, age 61, both hemispheres
103.9
Dorsolateral tegmental area nTPM: 151.6
2751
Female, age 85, both hemispheres
170.3
2337
Male, age 61, both hemispheres
162.8
2654
Male, age 80, both hemispheres
151.4
2360
Male, age 74, both hemispheres
146.4
2141
Male, age 76, both hemispheres
127.0
Kolliker-Fuse nucleus nTPM: 140.1
2315
Male, age 76, right hemisphere
164.8
2163
Male, age 80, both hemispheres
155.4
2793
Female, age 91, left hemisphere
100.0
Lateral lemniscal nuclei nTPM: 110.9
2746
Female, age 85, left hemisphere
122.4
2169
Male, age 76, both hemispheres
120.0
2036
Male, age 80, both hemispheres
116.4
2453
Male, age 74, right hemisphere
109.9
2320
Female, age 91, left hemisphere
86.1
Lateral parabrachial nucleus nTPM: 138.2
2139
Female, age 85, right hemisphere
151.4
2013
Male, age 80, both hemispheres
147.0
2792
Male, age 76, both hemispheres
132.0
2790
Male, age 61, both hemispheres
122.6
Lateral vestibular nucleus nTPM: 133.3
2311
Male, age 80, both hemispheres
135.1
2184
Male, age 76, both hemispheres
131.5
Locus coeruleus nTPM: 159.5
2123
Female, age 91, both hemispheres
189.4
2014
Male, age 55, unknown
183.8
1980
Male, age 76, both hemispheres
170.4
2317
Female, age 72, unknown
168.8
2788
Male, age 74, unknown
152.2
2720
Male, age 74, both hemispheres
139.9
2162
Male, age 80, both hemispheres
111.7
Medial parabrachial nucleus nTPM: 140.0
2170
Female, age 91, both hemispheres
181.8
2854
Male, age 80, both hemispheres
145.2
2463
Female, age 85, right hemisphere
128.6
2156
Male, age 61, both hemispheres
122.7
2786
Male, age 76, both hemispheres
121.8
Medial periolivary nuclei nTPM: 127.0
2791
Male, age 74, right hemisphere
181.0
2063
Male, age 76, both hemispheres
136.9
2171
Female, age 85, both hemispheres
117.2
2081
Male, age 80, both hemispheres
107.7
2458
Female, age 91, both hemispheres
92.3
Motor facial nucleus nTPM: 115.4
2365
Male, age 74, right hemisphere
169.4
2062
Male, age 76, both hemispheres
132.5
2126
Male, age 61, both hemispheres
123.8
2795
Female, age 91, both hemispheres
99.6
2697
Female, age 85, both hemispheres
89.5
2327
Male, age 80, both hemispheres
77.8
Motor trigeminal nucleus nTPM: 119.5
2309
Male, age 76, both hemispheres
129.1
2560
Male, age 74, both hemispheres
127.8
2335
Male, age 61, both hemispheres
124.9
2079
Male, age 80, both hemispheres
113.9
2321
Female, age 91, both hemispheres
102.0
Nuclei of the trapezoid body nTPM: 120.0
1983
Male, age 76, both hemispheres
151.4
2159
Male, age 61, both hemispheres
135.8
2735
Female, age 85, both hemispheres
119.9
2166
Male, age 80, both hemispheres
108.7
2368
Female, age 91, both hemispheres
84.4
Nucleus raphe magnus nTPM: 122.3
2160
Male, age 61, both hemispheres
167.4
2455
Male, age 74, both hemispheres
143.2
2051
Male, age 76, both hemispheres
123.8
2172
Female, age 85, both hemispheres
110.0
2459
Female, age 91, both hemispheres
95.2
2328
Male, age 80, both hemispheres
94.0
Paramedian reticular nucleus nTPM: 146.8
2050
Female, age 85, both hemispheres
161.0
2313
Male, age 61, both hemispheres
149.4
2057
Male, age 80, both hemispheres
148.2
2052
Male, age 76, both hemispheres
128.4
Pedunculopontine tegmental nucleus nTPM: 153.8
1921
Female, age 85, both hemispheres
155.7
2334
Male, age 80, both hemispheres
155.0
2338
Male, age 61, both hemispheres
150.9
Pontine nuclei nTPM: 149.2
1863
Male, age 55, unknown
184.4
2109
Female, age 72, unknown
169.4
2454
Male, age 74, left hemisphere
168.8
2727
Male, age 61, right hemisphere
166.5
2787
Female, age 85, both hemispheres
143.6
1968
Male, age 76, left hemisphere
128.1
2319
Female, age 91, both hemispheres
121.4
2115
Male, age 80, left hemisphere
111.4
Pontine raphe nucleus nTPM: 145.7
2853
Male, age 76, midline
152.1
2122
Female, age 85, midline
139.4
Posteroventral cochlear nucleus nTPM: 138.7
2341
Male, age 80, both hemispheres
152.0
2752
Female, age 85, both hemispheres
144.6
2070
Male, age 76, both hemispheres
135.4
2135
Female, age 91, both hemispheres
134.6
2371
Male, age 61, both hemispheres
126.9
Principal sensory trigeminal nucleus nTPM: 120.1
2158
Male, age 61, both hemispheres
144.8
2324
Male, age 76, both hemispheres
121.9
2008
Male, age 80, left hemisphere
115.3
2367
Female, age 91, left hemisphere
98.5
Reticular pontine nucleus, caudal nTPM: 112.7
2092
Male, age 76, both hemispheres
144.3
2559
Male, age 74, both hemispheres
136.4
2457
Female, age 91, both hemispheres
88.1
2332
Male, age 80, right hemisphere
82.1
Reticular pontine nucleus, oral nTPM: 146.5
1939
Male, age 80, both hemispheres
168.9
2361
Male, age 74, both hemispheres
161.7
2012
Female, age 85, both hemispheres
149.5
2167
Male, age 76, both hemispheres
141.2
2366
Female, age 91, both hemispheres
111.2
Reticulotegmental nucleus nTPM: 120.6
2452
Male, age 74, both hemispheres
130.6
2325
Male, age 76, both hemispheres
128.8
2333
Male, age 80, both hemispheres
112.8
2322
Female, age 91, both hemispheres
110.0
Spinal trigeminal nucleus, oral nTPM: 131.3
2737
Female, age 85, both hemispheres
147.1
1978
Male, age 76, both hemispheres
133.7
2164
Male, age 80, both hemispheres
113.2
Subcoeruleus area nTPM: 142.2
2369
Female, age 85, left hemisphere
162.4
1958
Male, age 80, both hemispheres
154.9
2451
Male, age 74, both hemispheres
152.3
2323
Female, age 91, left hemisphere
134.8
2089
Male, age 76, left hemisphere
106.4
Superior olive nTPM: 125.8
2364
Male, age 74, right hemisphere
169.1
1875
Female, age 85, both hemispheres
153.9
2020
Male, age 76, both hemispheres
123.5
2329
Male, age 80, right hemisphere
94.6
2561
Female, age 91, both hemispheres
87.9
Ventral periolivary nuclei nTPM: 112.7
2023
Male, age 76, both hemispheres
145.7
2165
Male, age 80, both hemispheres
120.3
2130
Female, age 85, both hemispheres
97.3
2794
Female, age 91, left hemisphere
87.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 123.5
2359
Male, age 61, both hemispheres
161.1
1959
Male, age 76, both hemispheres
134.6
2449
Male, age 74, both hemispheres
120.6
2840
Female, age 85, both hemispheres
115.1
2161
Male, age 80, both hemispheres
113.6
2456
Female, age 91, both hemispheres
96.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
514.3
Pig sample
Sample description
nTPM
Pons nTPM: 514.3
Samples: 4
Max nTPM: 606.0
Min nTPM: 375.2
Sample A
Female
540.7
Sample B
Female
375.2
Sample C
Male
535.2
Sample D
Male
606.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
