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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
150.0
nTPM
FANTOM5:
80.3
Scaled Tags Per Million
Pig:
9.8
nTPM
Allen mouse:
0.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
150.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 139.2
2090
Male, age 80, both hemispheres
160.7
2301
Female, age 85, both hemispheres
160.4
2188
Female, age 91, both hemispheres
152.4
1984
Male, age 76, both hemispheres
83.3
Dorsal cochlear nucleus nTPM: 120.8
2378
Male, age 80, both hemispheres
135.0
2370
Male, age 61, both hemispheres
122.7
2187
Female, age 91, both hemispheres
116.6
2058
Male, age 76, both hemispheres
116.4
2802
Male, age 74, right hemisphere
113.2
Dorsal tegmental nucleus nTPM: 112.1
2083
Male, age 80, both hemispheres
126.6
1936
Male, age 76, left hemisphere
124.7
2326
Male, age 74, both hemispheres
110.3
2358
Male, age 61, both hemispheres
86.9
Dorsolateral tegmental area nTPM: 126.4
2337
Male, age 61, both hemispheres
187.1
2751
Female, age 85, both hemispheres
135.4
2654
Male, age 80, both hemispheres
120.3
2360
Male, age 74, both hemispheres
101.0
2141
Male, age 76, both hemispheres
88.3
Kolliker-Fuse nucleus nTPM: 119.3
2793
Female, age 91, left hemisphere
168.7
2163
Male, age 80, both hemispheres
104.2
2315
Male, age 76, right hemisphere
85.2
Lateral lemniscal nuclei nTPM: 121.2
2320
Female, age 91, left hemisphere
149.9
2746
Female, age 85, left hemisphere
141.7
2036
Male, age 80, both hemispheres
115.8
2169
Male, age 76, both hemispheres
102.6
2453
Male, age 74, right hemisphere
95.9
Lateral parabrachial nucleus nTPM: 142.7
2792
Male, age 76, both hemispheres
171.5
2013
Male, age 80, both hemispheres
157.0
2790
Male, age 61, both hemispheres
147.3
2139
Female, age 85, right hemisphere
94.8
Lateral vestibular nucleus nTPM: 137.2
2184
Male, age 76, both hemispheres
149.1
2311
Male, age 80, both hemispheres
125.3
Locus coeruleus nTPM: 67.0
2162
Male, age 80, both hemispheres
80.6
2720
Male, age 74, both hemispheres
79.5
2317
Female, age 72, unknown
76.3
2123
Female, age 91, both hemispheres
59.6
2014
Male, age 55, unknown
59.5
1980
Male, age 76, both hemispheres
56.7
2788
Male, age 74, unknown
56.5
Medial parabrachial nucleus nTPM: 133.6
2156
Male, age 61, both hemispheres
149.3
2786
Male, age 76, both hemispheres
147.6
2463
Female, age 85, right hemisphere
132.6
2170
Female, age 91, both hemispheres
126.2
2854
Male, age 80, both hemispheres
112.1
Medial periolivary nuclei nTPM: 114.9
2081
Male, age 80, both hemispheres
164.8
2458
Female, age 91, both hemispheres
145.8
2791
Male, age 74, right hemisphere
104.3
2171
Female, age 85, both hemispheres
80.1
2063
Male, age 76, both hemispheres
79.5
Motor facial nucleus nTPM: 114.9
2126
Male, age 61, both hemispheres
169.5
2697
Female, age 85, both hemispheres
157.9
2365
Male, age 74, right hemisphere
98.8
2327
Male, age 80, both hemispheres
97.6
2795
Female, age 91, both hemispheres
96.5
2062
Male, age 76, both hemispheres
69.3
Motor trigeminal nucleus nTPM: 140.3
2321
Female, age 91, both hemispheres
160.2
2309
Male, age 76, both hemispheres
155.8
2560
Male, age 74, both hemispheres
131.0
2335
Male, age 61, both hemispheres
128.6
2079
Male, age 80, both hemispheres
126.0
Nuclei of the trapezoid body nTPM: 99.5
2166
Male, age 80, both hemispheres
150.6
2159
Male, age 61, both hemispheres
110.1
2368
Female, age 91, both hemispheres
109.4
1983
Male, age 76, both hemispheres
71.9
2735
Female, age 85, both hemispheres
55.7
Nucleus raphe magnus nTPM: 98.0
2459
Female, age 91, both hemispheres
132.8
2051
Male, age 76, both hemispheres
126.9
2328
Male, age 80, both hemispheres
125.3
2455
Male, age 74, both hemispheres
89.9
2172
Female, age 85, both hemispheres
58.9
2160
Male, age 61, both hemispheres
54.2
Paramedian reticular nucleus nTPM: 102.1
2057
Male, age 80, both hemispheres
121.1
2052
Male, age 76, both hemispheres
105.4
2050
Female, age 85, both hemispheres
97.3
2313
Male, age 61, both hemispheres
84.6
Pedunculopontine tegmental nucleus nTPM: 118.9
2338
Male, age 61, both hemispheres
151.9
2334
Male, age 80, both hemispheres
103.4
1921
Female, age 85, both hemispheres
101.5
Pontine nuclei nTPM: 134.6
2115
Male, age 80, left hemisphere
189.2
2319
Female, age 91, both hemispheres
179.7
1968
Male, age 76, left hemisphere
152.3
2454
Male, age 74, left hemisphere
137.9
2109
Female, age 72, unknown
120.7
2787
Female, age 85, both hemispheres
104.7
1863
Male, age 55, unknown
100.7
2727
Male, age 61, right hemisphere
91.7
Pontine raphe nucleus nTPM: 87.2
2122
Female, age 85, midline
87.8
2853
Male, age 76, midline
86.6
Posteroventral cochlear nucleus nTPM: 150.0
2135
Female, age 91, both hemispheres
206.4
2341
Male, age 80, both hemispheres
165.9
2070
Male, age 76, both hemispheres
149.1
2371
Male, age 61, both hemispheres
144.8
2752
Female, age 85, both hemispheres
83.8
Principal sensory trigeminal nucleus nTPM: 115.9
2367
Female, age 91, left hemisphere
146.3
2324
Male, age 76, both hemispheres
139.0
2008
Male, age 80, left hemisphere
92.6
2158
Male, age 61, both hemispheres
85.6
Reticular pontine nucleus, caudal nTPM: 134.8
2457
Female, age 91, both hemispheres
143.4
2559
Male, age 74, both hemispheres
142.1
2092
Male, age 76, both hemispheres
136.9
2332
Male, age 80, right hemisphere
116.8
Reticular pontine nucleus, oral nTPM: 139.3
2366
Female, age 91, both hemispheres
174.2
2167
Male, age 76, both hemispheres
144.0
1939
Male, age 80, both hemispheres
131.4
2012
Female, age 85, both hemispheres
125.7
2361
Male, age 74, both hemispheres
121.0
Reticulotegmental nucleus nTPM: 111.6
2333
Male, age 80, both hemispheres
123.6
2452
Male, age 74, both hemispheres
118.0
2322
Female, age 91, both hemispheres
117.8
2325
Male, age 76, both hemispheres
86.9
Spinal trigeminal nucleus, oral nTPM: 114.6
2164
Male, age 80, both hemispheres
129.3
1978
Male, age 76, both hemispheres
126.3
2737
Female, age 85, both hemispheres
88.2
Subcoeruleus area nTPM: 119.6
2369
Female, age 85, left hemisphere
164.8
2089
Male, age 76, left hemisphere
146.0
2451
Male, age 74, both hemispheres
111.5
2323
Female, age 91, left hemisphere
91.1
1958
Male, age 80, both hemispheres
84.3
Superior olive nTPM: 128.8
2020
Male, age 76, both hemispheres
146.2
2329
Male, age 80, right hemisphere
142.3
2561
Female, age 91, both hemispheres
137.9
2364
Male, age 74, right hemisphere
112.8
1875
Female, age 85, both hemispheres
104.7
Ventral periolivary nuclei nTPM: 108.4
2023
Male, age 76, both hemispheres
142.5
2794
Female, age 91, left hemisphere
105.8
2165
Male, age 80, both hemispheres
99.8
2130
Female, age 85, both hemispheres
85.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 127.2
2456
Female, age 91, both hemispheres
153.0
2359
Male, age 61, both hemispheres
143.4
1959
Male, age 76, both hemispheres
124.0
2840
Female, age 85, both hemispheres
121.8
2161
Male, age 80, both hemispheres
118.9
2449
Male, age 74, both hemispheres
101.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
9.8
Pig sample
Sample description
nTPM
Pons nTPM: 9.8
Samples: 4
Max nTPM: 12.9
Min nTPM: 8.1
Sample A
Female
9.9
Sample B
Female
8.1
Sample C
Male
8.4
Sample D
Male
12.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
