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IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
B-cells
B-CELLS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:1099.5 nTPM
Monaco:8805.1 nTPM
Schmiedel:9663.9 TPM

B-CELLS - Annotated protein expression
Pending normal tissue analysis

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 1099.5
HPA sample nTPM
Memory B-cell
nTPM: 982.3
Samples: 6

Max nTPM: 2024.0
Min nTPM: 506.7
P10809_1017 2024.0
P10809_1025 654.5
P10809_1044 995.9
P10809_1063 1018.8
P10809_1092 693.6
P10809_1105 506.7
Naive B-cell
nTPM: 1099.5
Samples: 6

Max nTPM: 2664.7
Min nTPM: 521.5
P10809_1011 2664.7
P10809_1029 837.6
P10809_1048 767.6
P10809_1067 1179.3
P10809_1091 626.3
P10809_1104 521.5

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 8805.1
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 6315.3
Samples: 4

Max nTPM: 8132.8
Min nTPM: 5558.1
RHH5310_R3677 5558.1
RHH5218_R3590 5928.2
RHH5247_R3619 8132.8
RHH5276_R3648 5642.0
Naive B-cell
nTPM: 5669.4
Samples: 4

Max nTPM: 6614.9
Min nTPM: 3993.6
RHH5308_R3675 5671.8
RHH5216_R3588 6397.2
RHH5245_R3617 3993.6
RHH5274_R3646 6614.9
Non-switched memory B-cell
nTPM: 7143.4
Samples: 4

Max nTPM: 10184.8
Min nTPM: 6062.0
RHH5309_R3676 6062.0
RHH5217_R3589 6165.7
RHH5246_R3618 10184.8
RHH5275_R3647 6161.2
Plasmablast
nTPM: 8805.1
Samples: 4

Max nTPM: 9476.1
Min nTPM: 8100.7
RHH5312_R3679 9476.1
RHH5220_R3592 9257.0
RHH5249_R3621 8386.7
RHH5278_R3650 8100.7
Switched memory B-cell
nTPM: 5508.4
Samples: 4

Max nTPM: 5722.6
Min nTPM: 5268.1
RHH5311_R3678 5365.0
RHH5219_R3591 5722.6
RHH5248_R3620 5677.8
RHH5277_R3649 5268.1

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 9663.9
Schmiedel sample id TPM
Naive B-cell
TPM: 9663.9
Samples: 91

Max TPM: 21278.7
Min TPM: 5476.2
B_CELL_NAIVE_1 21278.7
B_CELL_NAIVE_2 17172.3
B_CELL_NAIVE_3 15285.2
B_CELL_NAIVE_4 14232.4
B_CELL_NAIVE_5 13572.7
B_CELL_NAIVE_6 13123.5
B_CELL_NAIVE_7 12745.2
B_CELL_NAIVE_8 12451.1
B_CELL_NAIVE_9 12416.7
B_CELL_NAIVE_10 12005.5
B_CELL_NAIVE_11 11601.2
B_CELL_NAIVE_12 11513.1
B_CELL_NAIVE_13 11507.8
B_CELL_NAIVE_14 11457.8
B_CELL_NAIVE_15 11304.7
B_CELL_NAIVE_16 11219.0
B_CELL_NAIVE_17 11192.6
B_CELL_NAIVE_18 11118.5
B_CELL_NAIVE_19 11018.9
B_CELL_NAIVE_20 10930.1
B_CELL_NAIVE_21 10889.6
B_CELL_NAIVE_22 10856.9
B_CELL_NAIVE_23 10723.9
B_CELL_NAIVE_24 10698.8
B_CELL_NAIVE_25 10543.6
B_CELL_NAIVE_26 10283.0
B_CELL_NAIVE_27 10255.5
B_CELL_NAIVE_28 10245.4
B_CELL_NAIVE_29 10220.1
B_CELL_NAIVE_30 10113.7
B_CELL_NAIVE_31 10076.6
B_CELL_NAIVE_32 9860.3
B_CELL_NAIVE_33 9854.1
B_CELL_NAIVE_34 9825.1
B_CELL_NAIVE_35 9811.7
B_CELL_NAIVE_36 9807.2
B_CELL_NAIVE_37 9796.6
B_CELL_NAIVE_38 9684.9
B_CELL_NAIVE_39 9628.4
B_CELL_NAIVE_40 9608.4
B_CELL_NAIVE_41 9493.3
B_CELL_NAIVE_42 9465.3
B_CELL_NAIVE_43 9423.7
B_CELL_NAIVE_44 9178.8
B_CELL_NAIVE_45 9174.9
B_CELL_NAIVE_46 9158.2
B_CELL_NAIVE_47 9133.1
B_CELL_NAIVE_48 9114.7
B_CELL_NAIVE_49 9045.2
B_CELL_NAIVE_50 9034.9
B_CELL_NAIVE_51 9018.9
B_CELL_NAIVE_52 8997.6
B_CELL_NAIVE_53 8991.4
B_CELL_NAIVE_54 8911.8
B_CELL_NAIVE_55 8874.1
B_CELL_NAIVE_56 8871.0
B_CELL_NAIVE_57 8772.2
B_CELL_NAIVE_58 8734.5
B_CELL_NAIVE_59 8704.2
B_CELL_NAIVE_60 8604.6
B_CELL_NAIVE_61 8524.3
B_CELL_NAIVE_62 8509.9
B_CELL_NAIVE_63 8438.3
B_CELL_NAIVE_64 8431.0
B_CELL_NAIVE_65 8241.1
B_CELL_NAIVE_66 8220.7
B_CELL_NAIVE_67 8152.4
B_CELL_NAIVE_68 8151.0
B_CELL_NAIVE_69 8139.6
B_CELL_NAIVE_70 8130.0
B_CELL_NAIVE_71 8127.0
B_CELL_NAIVE_72 8107.2
B_CELL_NAIVE_73 8073.4
B_CELL_NAIVE_74 8029.4
B_CELL_NAIVE_75 8015.8
B_CELL_NAIVE_76 7917.4
B_CELL_NAIVE_77 7845.4
B_CELL_NAIVE_78 7841.0
B_CELL_NAIVE_79 7823.3
B_CELL_NAIVE_80 7772.3
B_CELL_NAIVE_81 7760.5
B_CELL_NAIVE_82 7735.7
B_CELL_NAIVE_83 7641.7
B_CELL_NAIVE_84 7636.2
B_CELL_NAIVE_85 7395.8
B_CELL_NAIVE_86 7291.0
B_CELL_NAIVE_87 7062.1
B_CELL_NAIVE_88 6997.0
B_CELL_NAIVE_89 5692.9
B_CELL_NAIVE_90 5602.0
B_CELL_NAIVE_91 5476.2
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