HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:46.2 nTPM
HPA Brain:73.9 nTPM
GTEx:46.2 nTPM
FANTOM5:135.0 Scaled Tags Per Million
Pig:112.1 nTPM
Mouse:73.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061273Antibody HPA067885
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.9
Sample id Sample description nTPM
Hippocampus
nTPM: 70.9
1898 Male, age 80, left hemisphere 78.5
1855 Male, age 76, left hemisphere 75.1
2148 Female, age 91, left hemisphere 74.2
2621 Female, age 67, right hemisphere 70.1
2529 Female, age 94, left hemisphere 69.9
1911 Female, age 85, right hemisphere 57.7
Dentate gyrus
nTPM: 64.8
2528 Male, age 74, both hemispheres 73.8
2246 Female, age 85, both hemispheres 71.4
2530 Female, age 94, left hemisphere 70.2
2531 Female, age 67, both hemispheres 63.1
2010 Male, age 76, both hemispheres 58.3
1927 Female, age 91, both hemispheres 52.1
Entorhinal gyrus
nTPM: 73.9
2117 Female, age 91, right hemisphere 89.0
2764 Male, age 80, right hemisphere 82.9
2686 Male, age 75, right hemisphere 77.8
2613 Female, age 94, left hemisphere 68.0
1938 Female, age 85, left hemisphere 64.0
1787 Male, age 76, left hemisphere 61.8
Hippocampus, CA1
nTPM: 65.3
2527 Male, age 74, both hemispheres 76.8
2045 Male, age 76, both hemispheres 71.5
2749 Male, age 80, left hemisphere 64.1
1873 Female, age 85, both hemispheres 60.8
2082 Female, age 91, right hemisphere 53.3
Hippocampus, CA2
nTPM: 61.3
1940 Female, age 85, left hemisphere 68.7
2113 Female, age 91, right hemisphere 65.2
2249 Male, age 74, both hemispheres 64.7
1963 Male, age 80, left hemisphere 61.8
2437 Female, age 94, left hemisphere 58.0
1892 Male, age 76, both hemispheres 49.5
Hippocampus, CA3
nTPM: 64.5
2861 Female, age 67, both hemispheres 85.5
2620 Female, age 94, left hemisphere 82.1
1891 Female, age 85, both hemispheres 66.3
1867 Male, age 76, both hemispheres 56.9
2137 Male, age 80, left hemisphere 49.9
2436 Male, age 74, both hemispheres 46.3
Parahippocampal cortex
nTPM: 66.3
2692 Male, age 74, both hemispheres 87.3
2622 Female, age 67, right hemisphere 73.7
1933 Female, age 85, both hemispheres 66.8
1990 Female, age 91, right hemisphere 66.3
1850 Male, age 80, both hemispheres 64.0
2532 Female, age 72, left hemisphere 63.8
2018 Male, age 76, both hemispheres 63.1
2693 Female, age 94, both hemispheres 61.0
2245 Female, age 91, both hemispheres 60.5
2250 Female, age 67, right hemisphere 56.3
Perirhinal gyrus
nTPM: 66.3
1794 Male, age 80, right hemisphere 80.0
2521 Female, age 94, right hemisphere 73.7
1847 Female, age 91, left hemisphere 63.6
1841 Female, age 85, right hemisphere 58.7
2848 Male, age 76, right hemisphere 55.2
Subiculum
nTPM: 71.9
2619 Male, age 74, both hemispheres 82.1
2729 Female, age 91, right hemisphere 79.0
1977 Female, age 85, both hemispheres 75.1
2042 Male, age 76, both hemispheres 66.1
1901 Male, age 80, both hemispheres 66.0
2438 Female, age 94, left hemisphere 63.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.2
Samples: 197

Max nTPM: 83.7
Min nTPM: 11.5
Std nTPM: 14.0
Median nTPM: 45.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 83.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 79.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 79.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 76.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 75.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 74.0
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 73.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 73.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 71.4
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 69.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 68.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 135.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.0
FF:10169-103B7 60 years, female 153.7
FF:10153-102I9 76 years, female 116.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 112.1
Pig sample Sample description nTPM
Subiculum
nTPM: 106.4
Samples: 4

Max nTPM: 131.9
Min nTPM: 96.6
Sample A Female 131.9
Sample B Female 97.7
Sample C Male 99.3
Sample D Male 96.6
Dorsal hippocampus
nTPM: 81.7
Samples: 4

Max nTPM: 108.9
Min nTPM: 65.5
Sample A Female 81.4
Sample B Female 65.5
Sample C Male 108.9
Sample D Male 71.0
Entorhinal cortex
nTPM: 112.2
Samples: 4

Max nTPM: 128.9
Min nTPM: 101.4
Sample A Female 101.4
Sample B Female 111.0
Sample C Male 128.9
Sample D Male 107.3
Ventral hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 81.0
Min nTPM: 54.6
Sample A Female 54.6
Sample B Female 62.9
Sample C Male 81.0
Sample D Male 77.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.9
Samples: 4

Max nTPM: 82.0
Min nTPM: 64.3
Sample A Male 74.0
Sample B Male 75.2
Sample C Female 64.3
Sample D Female 82.0
Hippocampal formation
nTPM: 59.4
Samples: 4

Max nTPM: 69.1
Min nTPM: 47.7
Sample A Male 61.0
Sample B Male 47.7
Sample C Female 69.1
Sample D Female 59.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
72283504 Antisense, RP_051019_01_E08, Mouse strain C57BL/6J (56 days, male) 0.3

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