HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:30.0 nTPM
HPA Brain:82.9 nTPM
GTEx:30.0 nTPM
FANTOM5:23.7 Scaled Tags Per Million
Pig:34.1 nTPM
Mouse:81.9 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041563
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.9
Sample id Sample description nTPM
Hippocampus
nTPM: 81.7
2148 Female, age 91, left hemisphere 105.6
2621 Female, age 67, right hemisphere 85.7
2529 Female, age 94, left hemisphere 77.8
1911 Female, age 85, right hemisphere 77.5
1855 Male, age 76, left hemisphere 72.0
1898 Male, age 80, left hemisphere 71.3
Dentate gyrus
nTPM: 75.8
1927 Female, age 91, both hemispheres 103.2
2531 Female, age 67, both hemispheres 91.7
2528 Male, age 74, both hemispheres 69.5
2010 Male, age 76, both hemispheres 66.8
2246 Female, age 85, both hemispheres 63.7
2530 Female, age 94, left hemisphere 60.2
Entorhinal gyrus
nTPM: 66.4
2613 Female, age 94, left hemisphere 80.0
2686 Male, age 75, right hemisphere 69.5
1938 Female, age 85, left hemisphere 65.3
2764 Male, age 80, right hemisphere 64.1
1787 Male, age 76, left hemisphere 62.0
2117 Female, age 91, right hemisphere 57.5
Hippocampus, CA1
nTPM: 82.9
2749 Male, age 80, left hemisphere 114.1
2045 Male, age 76, both hemispheres 85.8
1873 Female, age 85, both hemispheres 81.0
2527 Male, age 74, both hemispheres 74.8
2082 Female, age 91, right hemisphere 58.6
Hippocampus, CA2
nTPM: 68.9
1963 Male, age 80, left hemisphere 97.0
1892 Male, age 76, both hemispheres 81.2
2437 Female, age 94, left hemisphere 71.5
2113 Female, age 91, right hemisphere 69.3
2249 Male, age 74, both hemispheres 48.4
1940 Female, age 85, left hemisphere 46.2
Hippocampus, CA3
nTPM: 82.1
2137 Male, age 80, left hemisphere 108.5
2861 Female, age 67, both hemispheres 101.1
2620 Female, age 94, left hemisphere 99.3
1867 Male, age 76, both hemispheres 75.4
1891 Female, age 85, both hemispheres 61.2
2436 Male, age 74, both hemispheres 46.8
Parahippocampal cortex
nTPM: 62.5
2245 Female, age 91, both hemispheres 100.1
2622 Female, age 67, right hemisphere 68.3
1933 Female, age 85, both hemispheres 66.0
2018 Male, age 76, both hemispheres 58.8
1990 Female, age 91, right hemisphere 57.2
1850 Male, age 80, both hemispheres 55.8
2692 Male, age 74, both hemispheres 55.7
2250 Female, age 67, right hemisphere 54.9
2532 Female, age 72, left hemisphere 54.2
2693 Female, age 94, both hemispheres 53.9
Perirhinal gyrus
nTPM: 62.4
1847 Female, age 91, left hemisphere 75.7
2521 Female, age 94, right hemisphere 65.5
1794 Male, age 80, right hemisphere 60.1
1841 Female, age 85, right hemisphere 56.4
2848 Male, age 76, right hemisphere 54.2
Subiculum
nTPM: 61.9
2729 Female, age 91, right hemisphere 68.7
1901 Male, age 80, both hemispheres 64.0
2438 Female, age 94, left hemisphere 63.4
2619 Male, age 74, both hemispheres 61.3
2042 Male, age 76, both hemispheres 59.1
1977 Female, age 85, both hemispheres 54.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 74.6
Min nTPM: 3.2
Std nTPM: 12.7
Median nTPM: 29.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 74.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 70.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 62.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 55.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 51.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 51.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 50.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 50.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 49.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 49.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.7
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 22.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.1
Pig sample Sample description nTPM
Subiculum
nTPM: 30.3
Samples: 4

Max nTPM: 40.9
Min nTPM: 23.3
Sample A Female 40.9
Sample B Female 23.3
Sample C Male 31.4
Sample D Male 25.7
Dorsal hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 37.2
Min nTPM: 26.8
Sample A Female 35.3
Sample B Female 36.9
Sample C Male 26.8
Sample D Male 37.2
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 36.2
Min nTPM: 25.0
Sample A Female 31.5
Sample B Female 25.7
Sample C Male 36.2
Sample D Male 25.0
Ventral hippocampus
nTPM: 33.8
Samples: 4

Max nTPM: 48.3
Min nTPM: 24.4
Sample A Female 32.3
Sample B Female 24.4
Sample C Male 48.3
Sample D Male 30.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.1
Samples: 4

Max nTPM: 75.0
Min nTPM: 65.3
Sample A Male 69.7
Sample B Male 74.3
Sample C Female 65.3
Sample D Female 75.0
Hippocampal formation
nTPM: 81.9
Samples: 4

Max nTPM: 91.8
Min nTPM: 72.3
Sample A Male 72.3
Sample B Male 91.8
Sample C Female 84.3
Sample D Female 79.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
73497059 Antisense, RP_051019_04_B10, Mouse strain C57BL/6J (56 days, male) 5.1

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