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IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
B-cells
B-CELLS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:39309.6 nTPM
Monaco:302960.0 nTPM
Schmiedel:6733.0 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 39309.6
HPA sample nTPM
Memory B-cell
nTPM: 39309.7
Samples: 6

Max nTPM: 49855.2
Min nTPM: 24494.6
P10809_1017 45141.4
P10809_1025 41944.7
P10809_1044 48217.4
P10809_1063 26204.6
P10809_1092 49855.2
P10809_1105 24494.6
Naive B-cell
nTPM: 35339.2
Samples: 6

Max nTPM: 126021.7
Min nTPM: 11480.0
P10809_1011 11480.0
P10809_1029 17978.1
P10809_1048 126021.7
P10809_1067 14078.0
P10809_1091 25905.1
P10809_1104 16572.4

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 302960.0
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 27071.3
Samples: 4

Max nTPM: 52617.5
Min nTPM: 11450.3
RHH5310_R3677 52617.5
RHH5218_R3590 11450.3
RHH5247_R3619 27942.4
RHH5276_R3648 16274.9
Naive B-cell
nTPM: 8118.2
Samples: 4

Max nTPM: 11282.0
Min nTPM: 5275.1
RHH5308_R3675 10629.0
RHH5216_R3588 11282.0
RHH5245_R3617 5286.5
RHH5274_R3646 5275.1
Non-switched memory B-cell
nTPM: 12073.5
Samples: 4

Max nTPM: 16671.0
Min nTPM: 7284.7
RHH5309_R3676 16671.0
RHH5217_R3589 8652.8
RHH5246_R3618 15685.4
RHH5275_R3647 7284.7
Plasmablast
nTPM: 302960.0
Samples: 4

Max nTPM: 413468.0
Min nTPM: 231181.7
RHH5312_R3679 314409.2
RHH5220_R3592 252781.1
RHH5249_R3621 413468.0
RHH5278_R3650 231181.7
Switched memory B-cell
nTPM: 16252.4
Samples: 4

Max nTPM: 26175.9
Min nTPM: 9365.7
RHH5311_R3678 26175.9
RHH5219_R3591 19311.4
RHH5248_R3620 10156.5
RHH5277_R3649 9365.7

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 6733.0
Schmiedel sample id TPM
Naive B-cell
TPM: 6733.0
Samples: 91

Max TPM: 13734.6
Min TPM: 2642.8
B_CELL_NAIVE_1 13734.6
B_CELL_NAIVE_2 10470.6
B_CELL_NAIVE_3 10418.2
B_CELL_NAIVE_4 9610.2
B_CELL_NAIVE_5 9079.1
B_CELL_NAIVE_6 9038.0
B_CELL_NAIVE_7 9004.6
B_CELL_NAIVE_8 8798.7
B_CELL_NAIVE_9 8795.3
B_CELL_NAIVE_10 8760.5
B_CELL_NAIVE_11 8713.9
B_CELL_NAIVE_12 8713.4
B_CELL_NAIVE_13 8531.6
B_CELL_NAIVE_14 8515.1
B_CELL_NAIVE_15 8462.1
B_CELL_NAIVE_16 8318.0
B_CELL_NAIVE_17 8235.9
B_CELL_NAIVE_18 8158.8
B_CELL_NAIVE_19 8129.1
B_CELL_NAIVE_20 8108.8
B_CELL_NAIVE_21 8051.3
B_CELL_NAIVE_22 7987.7
B_CELL_NAIVE_23 7842.9
B_CELL_NAIVE_24 7797.7
B_CELL_NAIVE_25 7717.5
B_CELL_NAIVE_26 7666.2
B_CELL_NAIVE_27 7582.0
B_CELL_NAIVE_28 7417.3
B_CELL_NAIVE_29 7397.3
B_CELL_NAIVE_30 7216.7
B_CELL_NAIVE_31 7216.4
B_CELL_NAIVE_32 7211.9
B_CELL_NAIVE_33 7171.4
B_CELL_NAIVE_34 7141.5
B_CELL_NAIVE_35 7081.5
B_CELL_NAIVE_36 7069.5
B_CELL_NAIVE_37 7063.7
B_CELL_NAIVE_38 7036.8
B_CELL_NAIVE_39 6949.7
B_CELL_NAIVE_40 6896.7
B_CELL_NAIVE_41 6868.4
B_CELL_NAIVE_42 6821.0
B_CELL_NAIVE_43 6818.0
B_CELL_NAIVE_44 6737.6
B_CELL_NAIVE_45 6736.7
B_CELL_NAIVE_46 6725.6
B_CELL_NAIVE_47 6719.9
B_CELL_NAIVE_48 6513.7
B_CELL_NAIVE_49 6470.4
B_CELL_NAIVE_50 6464.9
B_CELL_NAIVE_51 6461.5
B_CELL_NAIVE_52 6443.1
B_CELL_NAIVE_53 6360.0
B_CELL_NAIVE_54 6209.2
B_CELL_NAIVE_55 6206.8
B_CELL_NAIVE_56 6184.3
B_CELL_NAIVE_57 6110.7
B_CELL_NAIVE_58 6076.5
B_CELL_NAIVE_59 6048.9
B_CELL_NAIVE_60 6034.5
B_CELL_NAIVE_61 5976.8
B_CELL_NAIVE_62 5939.8
B_CELL_NAIVE_63 5901.8
B_CELL_NAIVE_64 5876.5
B_CELL_NAIVE_65 5816.7
B_CELL_NAIVE_66 5802.0
B_CELL_NAIVE_67 5778.9
B_CELL_NAIVE_68 5689.6
B_CELL_NAIVE_69 5619.7
B_CELL_NAIVE_70 5562.8
B_CELL_NAIVE_71 5519.3
B_CELL_NAIVE_72 5492.1
B_CELL_NAIVE_73 5489.1
B_CELL_NAIVE_74 5299.8
B_CELL_NAIVE_75 5274.2
B_CELL_NAIVE_76 5215.4
B_CELL_NAIVE_77 5121.8
B_CELL_NAIVE_78 5053.9
B_CELL_NAIVE_79 5017.5
B_CELL_NAIVE_80 4979.9
B_CELL_NAIVE_81 4766.6
B_CELL_NAIVE_82 4519.8
B_CELL_NAIVE_83 4365.3
B_CELL_NAIVE_84 4286.7
B_CELL_NAIVE_85 4212.6
B_CELL_NAIVE_86 4193.6
B_CELL_NAIVE_87 4098.9
B_CELL_NAIVE_88 3962.8
B_CELL_NAIVE_89 3869.6
B_CELL_NAIVE_90 3234.6
B_CELL_NAIVE_91 2642.8
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