HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:129.5 nTPM
HPA Brain:156.1 nTPM
GTEx:129.5 nTPM
FANTOM5:182.4 Scaled Tags Per Million
Pig:209.8 nTPM
Mouse:477.4 nTPM
Allen mouse:18.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030780Antibody CAB005885Antibody CAB072343
Glial cells Not detectedHighNot detected
Neuronal cells MediumHighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.1
Sample id Sample description nTPM
Hippocampus
nTPM: 125.5
1898 Male, age 80, left hemisphere 171.1
1855 Male, age 76, left hemisphere 131.0
2621 Female, age 67, right hemisphere 124.8
2529 Female, age 94, left hemisphere 112.9
2148 Female, age 91, left hemisphere 108.0
1911 Female, age 85, right hemisphere 105.3
Dentate gyrus
nTPM: 127.6
1927 Female, age 91, both hemispheres 156.3
2010 Male, age 76, both hemispheres 151.2
2246 Female, age 85, both hemispheres 129.5
2530 Female, age 94, left hemisphere 120.6
2528 Male, age 74, both hemispheres 113.0
2531 Female, age 67, both hemispheres 94.7
Entorhinal gyrus
nTPM: 113.5
2764 Male, age 80, right hemisphere 131.9
1938 Female, age 85, left hemisphere 129.2
1787 Male, age 76, left hemisphere 118.0
2613 Female, age 94, left hemisphere 106.6
2117 Female, age 91, right hemisphere 102.0
2686 Male, age 75, right hemisphere 93.6
Hippocampus, CA1
nTPM: 148.0
2749 Male, age 80, left hemisphere 231.8
1873 Female, age 85, both hemispheres 138.8
2045 Male, age 76, both hemispheres 134.9
2527 Male, age 74, both hemispheres 129.1
2082 Female, age 91, right hemisphere 105.2
Hippocampus, CA2
nTPM: 136.7
1892 Male, age 76, both hemispheres 173.0
1963 Male, age 80, left hemisphere 164.3
2249 Male, age 74, both hemispheres 149.8
1940 Female, age 85, left hemisphere 122.5
2113 Female, age 91, right hemisphere 106.3
2437 Female, age 94, left hemisphere 104.2
Hippocampus, CA3
nTPM: 137.0
2436 Male, age 74, both hemispheres 182.5
2137 Male, age 80, left hemisphere 174.8
1867 Male, age 76, both hemispheres 144.1
2620 Female, age 94, left hemisphere 117.2
1891 Female, age 85, both hemispheres 110.2
2861 Female, age 67, both hemispheres 93.3
Parahippocampal cortex
nTPM: 129.0
1850 Male, age 80, both hemispheres 160.4
2245 Female, age 91, both hemispheres 151.0
2250 Female, age 67, right hemisphere 145.0
1990 Female, age 91, right hemisphere 133.1
1933 Female, age 85, both hemispheres 132.6
2018 Male, age 76, both hemispheres 130.8
2532 Female, age 72, left hemisphere 127.9
2693 Female, age 94, both hemispheres 113.6
2692 Male, age 74, both hemispheres 101.1
2622 Female, age 67, right hemisphere 94.2
Perirhinal gyrus
nTPM: 156.1
1847 Female, age 91, left hemisphere 187.0
1794 Male, age 80, right hemisphere 166.0
1841 Female, age 85, right hemisphere 161.9
2521 Female, age 94, right hemisphere 144.9
2848 Male, age 76, right hemisphere 120.4
Subiculum
nTPM: 114.6
1901 Male, age 80, both hemispheres 133.7
1977 Female, age 85, both hemispheres 133.2
2438 Female, age 94, left hemisphere 111.1
2619 Male, age 74, both hemispheres 108.4
2042 Male, age 76, both hemispheres 105.9
2729 Female, age 91, right hemisphere 95.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 129.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 129.5
Samples: 197

Max nTPM: 287.4
Min nTPM: 50.9
Std nTPM: 51.1
Median nTPM: 123.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 287.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 264.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 239.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 234.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 232.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 229.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 226.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 223.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 218.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 218.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 218.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.4
FF:10169-103B7 60 years, female 226.4
FF:10153-102I9 76 years, female 138.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 209.8
Pig sample Sample description nTPM
Subiculum
nTPM: 195.1
Samples: 4

Max nTPM: 243.1
Min nTPM: 171.5
Sample A Female 243.1
Sample B Female 177.4
Sample C Male 171.5
Sample D Male 188.3
Dorsal hippocampus
nTPM: 198.6
Samples: 4

Max nTPM: 246.4
Min nTPM: 157.3
Sample A Female 246.4
Sample B Female 197.6
Sample C Male 193.1
Sample D Male 157.3
Entorhinal cortex
nTPM: 209.8
Samples: 4

Max nTPM: 244.8
Min nTPM: 177.9
Sample A Female 210.6
Sample B Female 244.8
Sample C Male 205.9
Sample D Male 177.9
Ventral hippocampus
nTPM: 192.8
Samples: 4

Max nTPM: 233.2
Min nTPM: 146.2
Sample A Female 218.5
Sample B Female 146.2
Sample C Male 233.2
Sample D Male 173.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 477.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 466.6
Samples: 4

Max nTPM: 516.0
Min nTPM: 438.0
Sample A Male 451.9
Sample B Male 460.5
Sample C Female 438.0
Sample D Female 516.0
Hippocampal formation
nTPM: 477.4
Samples: 4

Max nTPM: 495.9
Min nTPM: 457.6
Sample A Male 495.9
Sample B Male 484.2
Sample C Female 471.9
Sample D Female 457.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.9
70194916 Antisense, RP_050517_02_A06, Mouse strain C57BL/6J (56 days, male) 20.7
70918898 Antisense, RP_050712_04_G03, Mouse strain C57BL/6J (56 days, male) 18.6
74957912 Antisense, RP_060315_05_A09, Mouse strain C57BL/6J (56 days, male) 17.4

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