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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
164.9
nTPM
FANTOM5:
343.7
Scaled Tags Per Million
Pig:
314.7
nTPM
Allen mouse:
14.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
164.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 100.7
1984
Male, age 76, both hemispheres
110.2
2188
Female, age 91, both hemispheres
101.0
2090
Male, age 80, both hemispheres
97.1
2301
Female, age 85, both hemispheres
94.6
Dorsal cochlear nucleus nTPM: 104.3
2187
Female, age 91, both hemispheres
118.7
2370
Male, age 61, both hemispheres
105.3
2058
Male, age 76, both hemispheres
104.6
2802
Male, age 74, right hemisphere
101.3
2378
Male, age 80, both hemispheres
91.4
Dorsal tegmental nucleus nTPM: 114.3
2358
Male, age 61, both hemispheres
121.9
2083
Male, age 80, both hemispheres
120.0
2326
Male, age 74, both hemispheres
111.6
1936
Male, age 76, left hemisphere
103.8
Dorsolateral tegmental area nTPM: 122.7
2751
Female, age 85, both hemispheres
137.6
2360
Male, age 74, both hemispheres
123.5
2654
Male, age 80, both hemispheres
121.2
2141
Male, age 76, both hemispheres
118.9
2337
Male, age 61, both hemispheres
112.4
Kolliker-Fuse nucleus nTPM: 118.4
2163
Male, age 80, both hemispheres
141.4
2315
Male, age 76, right hemisphere
110.7
2793
Female, age 91, left hemisphere
103.0
Lateral lemniscal nuclei nTPM: 121.0
2169
Male, age 76, both hemispheres
144.4
2036
Male, age 80, both hemispheres
138.1
2746
Female, age 85, left hemisphere
126.4
2453
Male, age 74, right hemisphere
109.7
2320
Female, age 91, left hemisphere
86.6
Lateral parabrachial nucleus nTPM: 114.6
2139
Female, age 85, right hemisphere
141.7
2013
Male, age 80, both hemispheres
116.2
2790
Male, age 61, both hemispheres
109.7
2792
Male, age 76, both hemispheres
90.7
Lateral vestibular nucleus nTPM: 114.5
2184
Male, age 76, both hemispheres
131.3
2311
Male, age 80, both hemispheres
97.8
Locus coeruleus nTPM: 164.9
2123
Female, age 91, both hemispheres
215.7
2014
Male, age 55, unknown
188.6
2720
Male, age 74, both hemispheres
170.5
2788
Male, age 74, unknown
157.0
1980
Male, age 76, both hemispheres
151.2
2317
Female, age 72, unknown
143.0
2162
Male, age 80, both hemispheres
128.1
Medial parabrachial nucleus nTPM: 121.8
2170
Female, age 91, both hemispheres
139.3
2854
Male, age 80, both hemispheres
133.3
2156
Male, age 61, both hemispheres
115.5
2786
Male, age 76, both hemispheres
110.6
2463
Female, age 85, right hemisphere
110.1
Medial periolivary nuclei nTPM: 124.6
2171
Female, age 85, both hemispheres
159.0
2063
Male, age 76, both hemispheres
145.8
2791
Male, age 74, right hemisphere
136.0
2081
Male, age 80, both hemispheres
95.7
2458
Female, age 91, both hemispheres
86.7
Motor facial nucleus nTPM: 122.3
2062
Male, age 76, both hemispheres
157.0
2365
Male, age 74, right hemisphere
143.0
2697
Female, age 85, both hemispheres
115.7
2327
Male, age 80, both hemispheres
113.0
2126
Male, age 61, both hemispheres
108.9
2795
Female, age 91, both hemispheres
96.2
Motor trigeminal nucleus nTPM: 108.8
2079
Male, age 80, both hemispheres
123.0
2335
Male, age 61, both hemispheres
116.7
2560
Male, age 74, both hemispheres
110.3
2309
Male, age 76, both hemispheres
104.7
2321
Female, age 91, both hemispheres
89.2
Nuclei of the trapezoid body nTPM: 135.0
2159
Male, age 61, both hemispheres
172.2
2735
Female, age 85, both hemispheres
161.8
1983
Male, age 76, both hemispheres
143.8
2166
Male, age 80, both hemispheres
109.6
2368
Female, age 91, both hemispheres
87.7
Nucleus raphe magnus nTPM: 139.5
2160
Male, age 61, both hemispheres
192.4
2172
Female, age 85, both hemispheres
166.3
2455
Male, age 74, both hemispheres
150.4
2051
Male, age 76, both hemispheres
119.2
2328
Male, age 80, both hemispheres
112.8
2459
Female, age 91, both hemispheres
96.1
Paramedian reticular nucleus nTPM: 141.5
2050
Female, age 85, both hemispheres
164.9
2313
Male, age 61, both hemispheres
148.6
2057
Male, age 80, both hemispheres
135.7
2052
Male, age 76, both hemispheres
116.9
Pedunculopontine tegmental nucleus nTPM: 126.4
2338
Male, age 61, both hemispheres
128.2
2334
Male, age 80, both hemispheres
128.0
1921
Female, age 85, both hemispheres
123.0
Pontine nuclei nTPM: 143.5
2727
Male, age 61, right hemisphere
183.3
1863
Male, age 55, unknown
180.6
2109
Female, age 72, unknown
165.7
2787
Female, age 85, both hemispheres
165.2
2454
Male, age 74, left hemisphere
130.0
1968
Male, age 76, left hemisphere
127.5
2115
Male, age 80, left hemisphere
100.5
2319
Female, age 91, both hemispheres
95.0
Pontine raphe nucleus nTPM: 145.3
2122
Female, age 85, midline
155.4
2853
Male, age 76, midline
135.2
Posteroventral cochlear nucleus nTPM: 112.0
2752
Female, age 85, both hemispheres
143.8
2070
Male, age 76, both hemispheres
120.0
2341
Male, age 80, both hemispheres
107.7
2371
Male, age 61, both hemispheres
102.6
2135
Female, age 91, both hemispheres
86.0
Principal sensory trigeminal nucleus nTPM: 127.5
2158
Male, age 61, both hemispheres
163.6
2008
Male, age 80, left hemisphere
137.2
2324
Male, age 76, both hemispheres
118.8
2367
Female, age 91, left hemisphere
90.5
Reticular pontine nucleus, caudal nTPM: 109.5
2332
Male, age 80, right hemisphere
120.4
2092
Male, age 76, both hemispheres
119.6
2559
Male, age 74, both hemispheres
107.2
2457
Female, age 91, both hemispheres
90.5
Reticular pontine nucleus, oral nTPM: 126.9
2012
Female, age 85, both hemispheres
146.3
2361
Male, age 74, both hemispheres
142.0
1939
Male, age 80, both hemispheres
137.2
2167
Male, age 76, both hemispheres
127.8
2366
Female, age 91, both hemispheres
81.1
Reticulotegmental nucleus nTPM: 115.2
2325
Male, age 76, both hemispheres
129.5
2452
Male, age 74, both hemispheres
114.3
2333
Male, age 80, both hemispheres
110.2
2322
Female, age 91, both hemispheres
106.7
Spinal trigeminal nucleus, oral nTPM: 120.3
2737
Female, age 85, both hemispheres
137.7
2164
Male, age 80, both hemispheres
121.9
1978
Male, age 76, both hemispheres
101.4
Subcoeruleus area nTPM: 121.6
2323
Female, age 91, left hemisphere
146.7
1958
Male, age 80, both hemispheres
131.7
2369
Female, age 85, left hemisphere
121.0
2089
Male, age 76, left hemisphere
109.2
2451
Male, age 74, both hemispheres
99.6
Superior olive nTPM: 124.8
1875
Female, age 85, both hemispheres
158.6
2364
Male, age 74, right hemisphere
150.7
2020
Male, age 76, both hemispheres
118.8
2329
Male, age 80, right hemisphere
104.8
2561
Female, age 91, both hemispheres
91.0
Ventral periolivary nuclei nTPM: 125.0
2130
Female, age 85, both hemispheres
151.0
2165
Male, age 80, both hemispheres
135.6
2023
Male, age 76, both hemispheres
116.0
2794
Female, age 91, left hemisphere
97.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 116.6
2840
Female, age 85, both hemispheres
142.6
2449
Male, age 74, both hemispheres
128.8
1959
Male, age 76, both hemispheres
116.9
2359
Male, age 61, both hemispheres
116.7
2161
Male, age 80, both hemispheres
110.8
2456
Female, age 91, both hemispheres
83.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
314.7
Pig sample
Sample description
nTPM
Pons nTPM: 314.7
Samples: 4
Max nTPM: 399.7
Min nTPM: 224.0
Sample A
Female
399.7
Sample B
Female
224.0
Sample C
Male
274.0
Sample D
Male
361.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
