HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:99.3 nTPM
HPA Brain:36.7 nTPM
GTEx:99.3 nTPM
FANTOM5:97.5 Scaled Tags Per Million
Pig:89.9 nTPM
Mouse:200.9 nTPM
Allen mouse:16.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004484Antibody CAB034894
Glial cells Not detectedMedium
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1898 Male, age 80, left hemisphere 44.2
2529 Female, age 94, left hemisphere 31.4
2148 Female, age 91, left hemisphere 28.2
1855 Male, age 76, left hemisphere 27.2
2621 Female, age 67, right hemisphere 24.3
1911 Female, age 85, right hemisphere 23.3
Dentate gyrus
nTPM: 28.8
1927 Female, age 91, both hemispheres 33.6
2010 Male, age 76, both hemispheres 32.7
2528 Male, age 74, both hemispheres 28.4
2530 Female, age 94, left hemisphere 28.4
2246 Female, age 85, both hemispheres 27.7
2531 Female, age 67, both hemispheres 22.2
Entorhinal gyrus
nTPM: 27.1
2764 Male, age 80, right hemisphere 35.1
1938 Female, age 85, left hemisphere 31.4
1787 Male, age 76, left hemisphere 29.8
2117 Female, age 91, right hemisphere 28.7
2613 Female, age 94, left hemisphere 18.9
2686 Male, age 75, right hemisphere 18.8
Hippocampus, CA1
nTPM: 36.7
2749 Male, age 80, left hemisphere 63.0
2527 Male, age 74, both hemispheres 33.4
1873 Female, age 85, both hemispheres 30.6
2045 Male, age 76, both hemispheres 28.8
2082 Female, age 91, right hemisphere 27.7
Hippocampus, CA2
nTPM: 33.9
1963 Male, age 80, left hemisphere 42.0
2249 Male, age 74, both hemispheres 40.4
1892 Male, age 76, both hemispheres 34.8
2113 Female, age 91, right hemisphere 29.2
2437 Female, age 94, left hemisphere 28.9
1940 Female, age 85, left hemisphere 28.3
Hippocampus, CA3
nTPM: 31.4
2137 Male, age 80, left hemisphere 44.7
2436 Male, age 74, both hemispheres 41.8
1867 Male, age 76, both hemispheres 32.8
1891 Female, age 85, both hemispheres 26.5
2620 Female, age 94, left hemisphere 24.4
2861 Female, age 67, both hemispheres 18.2
Parahippocampal cortex
nTPM: 26.7
1850 Male, age 80, both hemispheres 33.0
1933 Female, age 85, both hemispheres 31.7
2250 Female, age 67, right hemisphere 31.3
1990 Female, age 91, right hemisphere 30.4
2245 Female, age 91, both hemispheres 30.1
2018 Male, age 76, both hemispheres 26.7
2693 Female, age 94, both hemispheres 22.7
2532 Female, age 72, left hemisphere 21.9
2692 Male, age 74, both hemispheres 19.9
2622 Female, age 67, right hemisphere 18.8
Perirhinal gyrus
nTPM: 32.6
1794 Male, age 80, right hemisphere 44.4
1847 Female, age 91, left hemisphere 41.9
1841 Female, age 85, right hemisphere 27.9
2521 Female, age 94, right hemisphere 27.5
2848 Male, age 76, right hemisphere 21.2
Subiculum
nTPM: 25.8
1977 Female, age 85, both hemispheres 32.5
1901 Male, age 80, both hemispheres 32.3
2729 Female, age 91, right hemisphere 25.4
2619 Male, age 74, both hemispheres 23.5
2042 Male, age 76, both hemispheres 22.5
2438 Female, age 94, left hemisphere 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.3
Samples: 197

Max nTPM: 243.6
Min nTPM: 36.1
Std nTPM: 32.0
Median nTPM: 94.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 243.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 213.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 201.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 192.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 171.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 164.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 163.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 159.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 158.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 157.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 155.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.5
FF:10169-103B7 60 years, female 127.7
FF:10153-102I9 76 years, female 67.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 89.9
Pig sample Sample description nTPM
Subiculum
nTPM: 70.2
Samples: 4

Max nTPM: 89.5
Min nTPM: 62.4
Sample A Female 89.5
Sample B Female 64.2
Sample C Male 62.4
Sample D Male 64.8
Dorsal hippocampus
nTPM: 89.9
Samples: 4

Max nTPM: 112.7
Min nTPM: 73.8
Sample A Female 112.7
Sample B Female 82.6
Sample C Male 90.4
Sample D Male 73.8
Entorhinal cortex
nTPM: 77.1
Samples: 4

Max nTPM: 92.5
Min nTPM: 61.8
Sample A Female 78.0
Sample B Female 92.5
Sample C Male 76.2
Sample D Male 61.8
Ventral hippocampus
nTPM: 83.9
Samples: 4

Max nTPM: 101.2
Min nTPM: 59.2
Sample A Female 93.5
Sample B Female 59.2
Sample C Male 101.2
Sample D Male 81.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 200.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 193.1
Samples: 4

Max nTPM: 208.5
Min nTPM: 180.6
Sample A Male 185.1
Sample B Male 208.5
Sample C Female 198.3
Sample D Female 180.6
Hippocampal formation
nTPM: 200.9
Samples: 4

Max nTPM: 218.2
Min nTPM: 186.3
Sample A Male 218.2
Sample B Male 186.3
Sample C Female 204.7
Sample D Female 194.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.9
67767465 Antisense, RP_040916_02_B04, Mouse strain C57BL/6J (56 days, male) 16.9

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