HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.5 nTPM
HPA Brain:35.9 nTPM
GTEx:15.5 nTPM
FANTOM5:32.3 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:33.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.9
Sample id Sample description nTPM
Hippocampus
nTPM: 35.9
2529 Female, age 94, left hemisphere 39.2
1855 Male, age 76, left hemisphere 38.3
1911 Female, age 85, right hemisphere 37.1
1898 Male, age 80, left hemisphere 36.2
2148 Female, age 91, left hemisphere 35.8
2621 Female, age 67, right hemisphere 29.1
Dentate gyrus
nTPM: 30.6
2246 Female, age 85, both hemispheres 35.0
2528 Male, age 74, both hemispheres 34.7
1927 Female, age 91, both hemispheres 31.1
2010 Male, age 76, both hemispheres 30.7
2530 Female, age 94, left hemisphere 26.9
2531 Female, age 67, both hemispheres 25.4
Entorhinal gyrus
nTPM: 28.2
2117 Female, age 91, right hemisphere 37.0
1938 Female, age 85, left hemisphere 32.0
1787 Male, age 76, left hemisphere 30.2
2764 Male, age 80, right hemisphere 25.9
2686 Male, age 75, right hemisphere 25.6
2613 Female, age 94, left hemisphere 18.6
Hippocampus, CA1
nTPM: 32.9
2082 Female, age 91, right hemisphere 36.5
2527 Male, age 74, both hemispheres 36.0
1873 Female, age 85, both hemispheres 35.6
2045 Male, age 76, both hemispheres 33.2
2749 Male, age 80, left hemisphere 23.0
Hippocampus, CA2
nTPM: 32.1
2113 Female, age 91, right hemisphere 40.4
2249 Male, age 74, both hemispheres 36.2
1940 Female, age 85, left hemisphere 32.2
1963 Male, age 80, left hemisphere 31.1
2437 Female, age 94, left hemisphere 27.7
1892 Male, age 76, both hemispheres 25.3
Hippocampus, CA3
nTPM: 32.0
2436 Male, age 74, both hemispheres 43.7
1891 Female, age 85, both hemispheres 37.9
1867 Male, age 76, both hemispheres 29.9
2861 Female, age 67, both hemispheres 28.6
2137 Male, age 80, left hemisphere 27.4
2620 Female, age 94, left hemisphere 24.5
Parahippocampal cortex
nTPM: 30.6
1933 Female, age 85, both hemispheres 36.4
2018 Male, age 76, both hemispheres 35.6
2692 Male, age 74, both hemispheres 33.1
2250 Female, age 67, right hemisphere 32.6
1850 Male, age 80, both hemispheres 31.8
2532 Female, age 72, left hemisphere 29.3
1990 Female, age 91, right hemisphere 28.4
2245 Female, age 91, both hemispheres 28.3
2693 Female, age 94, both hemispheres 26.7
2622 Female, age 67, right hemisphere 23.5
Perirhinal gyrus
nTPM: 29.3
1794 Male, age 80, right hemisphere 32.1
2521 Female, age 94, right hemisphere 30.1
1841 Female, age 85, right hemisphere 29.9
1847 Female, age 91, left hemisphere 29.2
2848 Male, age 76, right hemisphere 25.2
Subiculum
nTPM: 32.7
2729 Female, age 91, right hemisphere 42.3
1977 Female, age 85, both hemispheres 33.1
2619 Male, age 74, both hemispheres 32.9
2042 Male, age 76, both hemispheres 31.1
2438 Female, age 94, left hemisphere 29.0
1901 Male, age 80, both hemispheres 27.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 35.4
Min nTPM: 6.8
Std nTPM: 4.3
Median nTPM: 15.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 35.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 32.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 28.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 26.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 25.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 23.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 22.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 22.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 22.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.3
FF:10169-103B7 60 years, female 34.2
FF:10153-102I9 76 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.7
Pig sample Sample description nTPM
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 17.5
Min nTPM: 13.6
Sample A Female 17.5
Sample B Female 14.0
Sample C Male 13.6
Sample D Male 16.1
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.0
Sample A Female 22.1
Sample B Female 15.6
Sample C Male 20.2
Sample D Male 13.0
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 17.2
Min nTPM: 10.1
Sample A Female 13.0
Sample B Female 17.2
Sample C Male 17.1
Sample D Male 10.1
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.1
Sample A Female 15.6
Sample B Female 13.1
Sample C Male 18.7
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 30.6
Min nTPM: 26.2
Sample A Male 29.7
Sample B Male 29.6
Sample C Female 30.6
Sample D Female 26.2
Hippocampal formation
nTPM: 33.4
Samples: 4

Max nTPM: 37.4
Min nTPM: 31.3
Sample A Male 31.3
Sample B Male 32.2
Sample C Female 37.4
Sample D Female 32.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
75774627 Antisense, RP_060530_01_A03, Mouse strain C57BL/6J (56 days, male) 0.7
75773649 Antisense, RP_060530_01_A03, Mouse strain C57BL/6J (56 days, male) 0.6

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