HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:43.9 nTPM
HPA Brain:21.7 nTPM
GTEx:43.9 nTPM
FANTOM5:21.5 Scaled Tags Per Million
Pig:6.4 nTPM
Mouse:0.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006655
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.7
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
2621 Female, age 67, right hemisphere 21.7
1898 Male, age 80, left hemisphere 17.9
2529 Female, age 94, left hemisphere 15.9
1855 Male, age 76, left hemisphere 15.3
1911 Female, age 85, right hemisphere 15.2
2148 Female, age 91, left hemisphere 9.7
Dentate gyrus
nTPM: 17.9
2531 Female, age 67, both hemispheres 22.3
2246 Female, age 85, both hemispheres 20.0
2010 Male, age 76, both hemispheres 19.1
2530 Female, age 94, left hemisphere 18.1
1927 Female, age 91, both hemispheres 17.5
2528 Male, age 74, both hemispheres 10.5
Entorhinal gyrus
nTPM: 19.3
1938 Female, age 85, left hemisphere 27.0
1787 Male, age 76, left hemisphere 23.1
2764 Male, age 80, right hemisphere 21.6
2613 Female, age 94, left hemisphere 21.3
2686 Male, age 75, right hemisphere 14.2
2117 Female, age 91, right hemisphere 8.9
Hippocampus, CA1
nTPM: 19.7
2749 Male, age 80, left hemisphere 30.4
2082 Female, age 91, right hemisphere 21.2
1873 Female, age 85, both hemispheres 18.0
2045 Male, age 76, both hemispheres 15.7
2527 Male, age 74, both hemispheres 13.4
Hippocampus, CA2
nTPM: 18.6
1892 Male, age 76, both hemispheres 25.6
1963 Male, age 80, left hemisphere 21.2
2249 Male, age 74, both hemispheres 20.0
2437 Female, age 94, left hemisphere 15.3
2113 Female, age 91, right hemisphere 15.1
1940 Female, age 85, left hemisphere 14.6
Hippocampus, CA3
nTPM: 19.0
2137 Male, age 80, left hemisphere 22.8
2436 Male, age 74, both hemispheres 22.1
1867 Male, age 76, both hemispheres 20.1
2861 Female, age 67, both hemispheres 20.0
2620 Female, age 94, left hemisphere 15.1
1891 Female, age 85, both hemispheres 13.8
Parahippocampal cortex
nTPM: 18.8
2250 Female, age 67, right hemisphere 24.7
1933 Female, age 85, both hemispheres 23.5
2018 Male, age 76, both hemispheres 20.6
2245 Female, age 91, both hemispheres 19.9
1990 Female, age 91, right hemisphere 19.6
1850 Male, age 80, both hemispheres 19.4
2532 Female, age 72, left hemisphere 19.4
2693 Female, age 94, both hemispheres 17.2
2622 Female, age 67, right hemisphere 13.1
2692 Male, age 74, both hemispheres 10.7
Perirhinal gyrus
nTPM: 21.7
1847 Female, age 91, left hemisphere 31.1
2848 Male, age 76, right hemisphere 22.4
1841 Female, age 85, right hemisphere 20.2
1794 Male, age 80, right hemisphere 19.8
2521 Female, age 94, right hemisphere 14.9
Subiculum
nTPM: 15.5
1977 Female, age 85, both hemispheres 29.3
1901 Male, age 80, both hemispheres 15.4
2042 Male, age 76, both hemispheres 14.7
2619 Male, age 74, both hemispheres 11.9
2729 Female, age 91, right hemisphere 11.7
2438 Female, age 94, left hemisphere 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.9
Samples: 197

Max nTPM: 141.4
Min nTPM: 7.9
Std nTPM: 22.1
Median nTPM: 39.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 141.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 137.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 122.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 117.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 113.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 105.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 101.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 94.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 89.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 89.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 87.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.5
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 15.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.4
Pig sample Sample description nTPM
Subiculum
nTPM: 5.4
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.6
Sample A Female 5.4
Sample B Female 5.1
Sample C Male 6.5
Sample D Male 4.6
Dorsal hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 2.3
Sample A Female 8.7
Sample B Female 4.5
Sample C Male 4.7
Sample D Male 2.3
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 4.7
Min nTPM: 2.8
Sample A Female 3.6
Sample B Female 4.7
Sample C Male 2.8
Sample D Male 3.0
Ventral hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 8.3
Min nTPM: 4.6
Sample A Female 8.3
Sample B Female 4.6
Sample C Male 8.2
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.0
Sample A Male 0.5
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.3
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.0
Sample A Male 0.7
Sample B Male 0.4
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70566005 Antisense, RP_050628_02_A08, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org