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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
33.1
nTPM
HPA Brain:
31.0
nTPM
GTEx:
33.1
nTPM
FANTOM5:
42.8
Scaled Tags Per Million
Pig:
18.6
nTPM
Mouse:
17.0
nTPM
Allen mouse:
2.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
31.0
Sample id
Sample description
nTPM
Amygdala nTPM: 23.8
1987
Female, age 91, left hemisphere
28.2
2517
Female, age 94, left hemisphere
27.6
2814
Male, age 76, right hemisphere
23.4
2695
Female, age 67, right hemisphere
20.9
2514
Male, age 75, right hemisphere
19.1
Basal amygdala nTPM: 28.6
2243
Female, age 91, right hemisphere
34.2
2685
Female, age 94, left hemisphere
31.7
2110
Male, age 80, left hemisphere
28.2
2827
Female, age 67, right hemisphere
27.8
2609
Male, age 75, right hemisphere
27.3
1955
Male, age 76, both hemispheres
22.2
Central amygdala nTPM: 28.7
2239
Male, age 80, left hemisphere
33.2
2515
Male, age 75, right hemisphere
32.7
2701
Female, age 91, right hemisphere
29.5
2826
Female, age 94, left hemisphere
27.0
1905
Male, age 76, both hemispheres
21.0
Corticomedial amygdala nTPM: 31.0
2535
Female, age 67, right hemisphere
37.5
2429
Female, age 94, left hemisphere
36.7
2242
Female, age 91, right hemisphere
33.4
2829
Male, age 80, left hemisphere
31.7
2428
Male, age 75, right hemisphere
24.9
2240
Male, age 76, both hemispheres
21.4
Lateral amygdala nTPM: 26.3
2255
Female, age 91, right hemisphere
34.1
2256
Male, age 80, left hemisphere
32.4
2534
Female, age 94, left hemisphere
28.5
2516
Male, age 75, right hemisphere
23.7
2830
Female, age 67, right hemisphere
19.7
1883
Male, age 76, both hemispheres
19.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
33.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 33.1
Samples: 152
Max nTPM: 75.5
Min nTPM: 11.7
Std nTPM: 9.3
Median nTPM: 32.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
75.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
61.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
55.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
55.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
55.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
52.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
50.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
48.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
48.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
45.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
44.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
44.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
44.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
44.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
43.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
43.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
43.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
42.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
41.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
41.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
41.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
41.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
41.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
41.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
41.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
41.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
40.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
40.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
40.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
40.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
40.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
39.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
39.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
39.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
38.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
38.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
38.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
38.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
37.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
37.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
37.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
37.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
36.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
36.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
36.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
35.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
35.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
35.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
35.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
35.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
35.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
35.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
35.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
35.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
35.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
35.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
34.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
34.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
34.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
34.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
34.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
34.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
33.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
33.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
33.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
33.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
33.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
33.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
33.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
32.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
32.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
32.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
32.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
32.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
31.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
31.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
31.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
31.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
30.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
30.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
30.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
30.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
30.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
30.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
29.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
29.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
29.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
29.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
29.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
28.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
28.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
28.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
28.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
28.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
28.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
28.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
28.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
28.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
27.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
27.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
27.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
27.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
27.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
27.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
27.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
27.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
26.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
26.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
26.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
26.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
26.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
26.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
26.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
25.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
25.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
25.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
25.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
25.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
25.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
24.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
24.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
24.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
24.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
24.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
24.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
24.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
24.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
24.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
23.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
23.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
23.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
23.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
22.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
22.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
21.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
21.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
21.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
21.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
21.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
21.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
20.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
18.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
18.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
16.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
14.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
11.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
17.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 17.0
Samples: 4
Max nTPM: 18.3
Min nTPM: 15.9
Sample A
Male
17.4
Sample B
Male
18.3
Sample C
Female
15.9
Sample D
Female
16.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.