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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3140.0
nTPM
Monaco:
466.7
nTPM
Schmiedel:
439.1
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3140.0
HPA sample
nTPM
Memory B-cell nTPM: 3140.0
Samples: 6
Max nTPM: 3997.6
Min nTPM: 2386.8
P10809_1017
2386.8
P10809_1025
3351.4
P10809_1044
3997.6
P10809_1063
2959.9
P10809_1092
2773.7
P10809_1105
3370.4
Naive B-cell nTPM: 3039.1
Samples: 6
Max nTPM: 3713.6
Min nTPM: 2421.9
P10809_1011
2421.9
P10809_1029
3288.7
P10809_1048
3713.6
P10809_1067
2823.0
P10809_1091
2596.4
P10809_1104
3391.1
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
466.7
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 466.7
Samples: 4
Max nTPM: 817.4
Min nTPM: 129.0
RHH5310_R3677
384.3
RHH5218_R3590
129.0
RHH5247_R3619
817.4
RHH5276_R3648
536.2
Naive B-cell nTPM: 423.0
Samples: 4
Max nTPM: 723.0
Min nTPM: 181.4
RHH5308_R3675
465.6
RHH5216_R3588
181.4
RHH5245_R3617
723.0
RHH5274_R3646
321.8
Non-switched memory B-cell nTPM: 335.9
Samples: 4
Max nTPM: 521.4
Min nTPM: 187.7
RHH5309_R3676
440.2
RHH5217_R3589
187.7
RHH5246_R3618
194.1
RHH5275_R3647
521.4
Plasmablast nTPM: 349.6
Samples: 4
Max nTPM: 431.1
Min nTPM: 227.3
RHH5312_R3679
431.1
RHH5220_R3592
227.3
RHH5249_R3621
331.7
RHH5278_R3650
408.2
Switched memory B-cell nTPM: 299.2
Samples: 4
Max nTPM: 392.1
Min nTPM: 186.8
RHH5311_R3678
392.1
RHH5219_R3591
229.3
RHH5248_R3620
186.8
RHH5277_R3649
388.4
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
