HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:420.7 nTPM
HPA Brain:139.7 nTPM
GTEx:420.7 nTPM
FANTOM5:77.6 Scaled Tags Per Million
Pig:153.8 nTPM
Mouse:138.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 139.7
Sample id Sample description nTPM
Hippocampus
nTPM: 139.7
2529 Female, age 94, left hemisphere 158.5
1898 Male, age 80, left hemisphere 156.3
1855 Male, age 76, left hemisphere 141.7
1911 Female, age 85, right hemisphere 129.1
2621 Female, age 67, right hemisphere 128.6
2148 Female, age 91, left hemisphere 124.1
Dentate gyrus
nTPM: 117.1
2530 Female, age 94, left hemisphere 136.6
2010 Male, age 76, both hemispheres 127.6
1927 Female, age 91, both hemispheres 126.1
2246 Female, age 85, both hemispheres 121.3
2531 Female, age 67, both hemispheres 103.2
2528 Male, age 74, both hemispheres 87.7
Entorhinal gyrus
nTPM: 119.0
1938 Female, age 85, left hemisphere 133.2
2686 Male, age 75, right hemisphere 127.9
2117 Female, age 91, right hemisphere 121.3
1787 Male, age 76, left hemisphere 121.0
2764 Male, age 80, right hemisphere 115.3
2613 Female, age 94, left hemisphere 95.3
Hippocampus, CA1
nTPM: 129.3
2749 Male, age 80, left hemisphere 153.0
2527 Male, age 74, both hemispheres 139.1
1873 Female, age 85, both hemispheres 129.7
2045 Male, age 76, both hemispheres 129.4
2082 Female, age 91, right hemisphere 95.1
Hippocampus, CA2
nTPM: 121.6
1892 Male, age 76, both hemispheres 146.4
2437 Female, age 94, left hemisphere 128.4
1963 Male, age 80, left hemisphere 125.4
2249 Male, age 74, both hemispheres 115.8
1940 Female, age 85, left hemisphere 111.2
2113 Female, age 91, right hemisphere 102.3
Hippocampus, CA3
nTPM: 118.7
1867 Male, age 76, both hemispheres 140.4
2137 Male, age 80, left hemisphere 130.7
1891 Female, age 85, both hemispheres 128.3
2436 Male, age 74, both hemispheres 122.3
2861 Female, age 67, both hemispheres 98.3
2620 Female, age 94, left hemisphere 92.1
Parahippocampal cortex
nTPM: 127.5
2245 Female, age 91, both hemispheres 159.9
2018 Male, age 76, both hemispheres 140.7
2250 Female, age 67, right hemisphere 139.6
1933 Female, age 85, both hemispheres 138.0
1850 Male, age 80, both hemispheres 132.0
2532 Female, age 72, left hemisphere 124.5
1990 Female, age 91, right hemisphere 116.9
2693 Female, age 94, both hemispheres 109.0
2622 Female, age 67, right hemisphere 108.0
2692 Male, age 74, both hemispheres 106.4
Perirhinal gyrus
nTPM: 131.0
1841 Female, age 85, right hemisphere 162.8
1847 Female, age 91, left hemisphere 132.8
1794 Male, age 80, right hemisphere 125.4
2521 Female, age 94, right hemisphere 121.3
2848 Male, age 76, right hemisphere 112.5
Subiculum
nTPM: 130.1
2438 Female, age 94, left hemisphere 158.7
2042 Male, age 76, both hemispheres 144.8
1901 Male, age 80, both hemispheres 139.3
1977 Female, age 85, both hemispheres 128.3
2619 Male, age 74, both hemispheres 111.3
2729 Female, age 91, right hemisphere 98.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 420.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 420.7
Samples: 197

Max nTPM: 1180.8
Min nTPM: 214.0
Std nTPM: 118.6
Median nTPM: 401.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1180.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 966.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 768.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 742.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 697.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 684.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 672.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 658.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 655.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 647.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 614.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.6
FF:10153-102I9 76 years, female 85.7
FF:10169-103B7 60 years, female 69.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 153.8
Pig sample Sample description nTPM
Subiculum
nTPM: 136.5
Samples: 4

Max nTPM: 184.3
Min nTPM: 112.5
Sample A Female 184.3
Sample B Female 127.3
Sample C Male 112.5
Sample D Male 121.9
Dorsal hippocampus
nTPM: 153.8
Samples: 4

Max nTPM: 209.5
Min nTPM: 109.5
Sample A Female 209.5
Sample B Female 149.7
Sample C Male 146.3
Sample D Male 109.5
Entorhinal cortex
nTPM: 144.8
Samples: 4

Max nTPM: 174.7
Min nTPM: 115.9
Sample A Female 123.6
Sample B Female 174.7
Sample C Male 165.0
Sample D Male 115.9
Ventral hippocampus
nTPM: 133.7
Samples: 4

Max nTPM: 145.6
Min nTPM: 122.9
Sample A Female 145.6
Sample B Female 122.9
Sample C Male 131.1
Sample D Male 135.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 138.0
Samples: 4

Max nTPM: 147.5
Min nTPM: 131.4
Sample A Male 131.4
Sample B Male 141.4
Sample C Female 147.5
Sample D Female 131.8
Hippocampal formation
nTPM: 124.7
Samples: 4

Max nTPM: 156.9
Min nTPM: 112.3
Sample A Male 156.9
Sample B Male 115.2
Sample C Female 112.3
Sample D Female 114.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71763951 Antisense, RP_050921_02_H07, Mouse strain C57BL/6J (56 days, male) 0.5

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