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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
257.2
nTPM
GTEx:
257.2
nTPM
FANTOM5:
58.9
Scaled Tags Per Million
Pig:
57.5
nTPM
Mouse:
1589.6
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
257.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 257.2
Samples: 105
Max nTPM: 401.1
Min nTPM: 154.3
Std nTPM: 39.5
Median nTPM:
322_1
76 years, male
401.1
35_1
74 years, female
353.8
319_1
81 years, male
340.9
4_1
88 years, female
338.0
321_1
62 years, female
330.1
218_1
71 years, female
326.3
375_1
74 years, female
322.1
377_1
82 years, female
321.8
2_1
77 years, female
319.1
17_1
71 years, male
312.8
6_1
73 years, female
311.3
379_1
60 years, male
307.7
153_1
70 years, female
304.4
384_1
83 years, male
297.5
394_1
75 years, female
297.5
162_1
79 years, female
296.8
447_1
81 years, male
293.1
389_1
86 years, female
291.2
237_1
82 years, male
290.6
265_1
87 years, male
289.5
452_1
88 years, female
287.1
142_1
61 years, female
286.2
120_1
70 years, female
285.1
163_1
78 years, male
284.0
518_1
75 years, female
282.3
173_1
67 years, male
282.0
139_1
64 years, female
280.3
386_1
76 years, male
280.1
354_1
81 years, female
279.6
316_1
62 years, male
278.4
376_1
75 years, female
273.5
503_1
68 years, male
272.7
119_1
70 years, female
270.9
243_1
75 years, male
269.6
404_1
82 years, female
269.4
352_1
62 years, male
267.9
313_1
79 years, female
267.4
217_1
76 years, male
265.2
315_1
62 years, female
265.2
246_1
77 years, male
263.0
115_1
83 years, male
262.3
293_1
68 years, female
262.0
320_1
89 years, female
260.8
126_1
63 years, male
260.3
177_1
74 years, male
256.9
117_1
61 years, male
256.1
415_1
77 years, female
255.0
499_1
55 years, female
253.6
18_1
88 years, male
253.1
99_1
64 years, male
252.5
396_1
62 years, male
251.9
307_1
66 years, female
251.7
266_1
85 years, male
250.5
468_1
89 years, male
250.4
286_1
68 years, female
250.0
355_1
70 years, female
249.7
145_1
84 years, male
249.6
229_1
69 years, female
247.7
318_1
68 years, male
247.6
495_1
57 years, female
245.8
109_1
81 years, female
245.7
264_1
73 years, female
244.6
356_1
87 years, female
244.5
506_1
65 years, male
244.5
348_1
84 years, male
243.5
311_1
78 years, male
243.3
350_1
84 years, female
242.3
324_1
76 years, male
241.5
349_1
83 years, male
241.2
526_1
61 years, male
240.4
9_1
66 years, female
240.2
42_1
85 years, male
240.0
351_1
91 years, male
239.7
317_1
60 years, male
239.5
405_1
91 years, male
239.1
254_1
77 years, female
238.4
406_1
79 years, male
237.7
189_1
76 years, male
237.6
335_1
73 years, female
235.4
251_1
78 years, male
235.3
295_1
61 years, female
233.0
425_1
59 years, female
232.7
137_1
83 years, male
230.3
347_1
72 years, male
229.8
292_1
71 years, male
226.2
517_1
88 years, male
225.8
149_1
88 years, male
224.3
353_1
82 years, female
223.8
501_1
88 years, male
223.7
89_1
63 years, male
222.9
41_1
94 years, female
220.3
466_1
57 years, female
217.4
480_1
63 years, male
217.2
288_1
66 years, female
216.8
414_1
84 years, female
216.5
308_1
70 years, female
215.5
291_1
76 years, male
207.4
43_1
64 years, female
204.9
81_1
67 years, male
201.8
172_1
72 years, female
197.3
491_1
89 years, female
193.9
490_1
67 years, female
185.1
32_1
67 years, male
177.4
314_1
67 years, male
173.4
413_1
59 years, female
154.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.