HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:75.3 nTPM
HPA Brain:39.2 nTPM
GTEx:75.3 nTPM
FANTOM5:78.9 Scaled Tags Per Million
Pig:75.3 nTPM
Mouse:96.2 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 36.6
1898 Male, age 80, left hemisphere 44.1
1855 Male, age 76, left hemisphere 42.1
1911 Female, age 85, right hemisphere 35.8
2621 Female, age 67, right hemisphere 33.3
2529 Female, age 94, left hemisphere 32.9
2148 Female, age 91, left hemisphere 31.4
Dentate gyrus
nTPM: 36.3
1927 Female, age 91, both hemispheres 42.2
2010 Male, age 76, both hemispheres 41.7
2246 Female, age 85, both hemispheres 37.7
2528 Male, age 74, both hemispheres 35.3
2530 Female, age 94, left hemisphere 32.4
2531 Female, age 67, both hemispheres 28.1
Entorhinal gyrus
nTPM: 32.5
1938 Female, age 85, left hemisphere 38.8
1787 Male, age 76, left hemisphere 34.1
2117 Female, age 91, right hemisphere 33.0
2764 Male, age 80, right hemisphere 32.3
2613 Female, age 94, left hemisphere 28.8
2686 Male, age 75, right hemisphere 27.9
Hippocampus, CA1
nTPM: 38.0
2749 Male, age 80, left hemisphere 48.7
1873 Female, age 85, both hemispheres 39.4
2527 Male, age 74, both hemispheres 35.9
2045 Male, age 76, both hemispheres 34.2
2082 Female, age 91, right hemisphere 32.0
Hippocampus, CA2
nTPM: 36.4
1892 Male, age 76, both hemispheres 39.4
2249 Male, age 74, both hemispheres 39.2
1963 Male, age 80, left hemisphere 38.4
2437 Female, age 94, left hemisphere 36.9
1940 Female, age 85, left hemisphere 33.3
2113 Female, age 91, right hemisphere 31.1
Hippocampus, CA3
nTPM: 37.5
2436 Male, age 74, both hemispheres 51.3
2137 Male, age 80, left hemisphere 40.4
1867 Male, age 76, both hemispheres 40.0
1891 Female, age 85, both hemispheres 38.2
2620 Female, age 94, left hemisphere 32.5
2861 Female, age 67, both hemispheres 22.4
Parahippocampal cortex
nTPM: 34.5
1850 Male, age 80, both hemispheres 39.6
2018 Male, age 76, both hemispheres 39.2
1933 Female, age 85, both hemispheres 37.0
2693 Female, age 94, both hemispheres 34.8
1990 Female, age 91, right hemisphere 34.6
2250 Female, age 67, right hemisphere 33.9
2532 Female, age 72, left hemisphere 33.3
2692 Male, age 74, both hemispheres 32.2
2245 Female, age 91, both hemispheres 31.4
2622 Female, age 67, right hemisphere 29.3
Perirhinal gyrus
nTPM: 39.2
1794 Male, age 80, right hemisphere 43.6
1841 Female, age 85, right hemisphere 43.5
1847 Female, age 91, left hemisphere 40.4
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 33.3
Subiculum
nTPM: 37.6
2438 Female, age 94, left hemisphere 48.7
1977 Female, age 85, both hemispheres 40.4
1901 Male, age 80, both hemispheres 37.8
2042 Male, age 76, both hemispheres 36.5
2619 Male, age 74, both hemispheres 32.1
2729 Female, age 91, right hemisphere 30.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.3
Samples: 197

Max nTPM: 214.6
Min nTPM: 42.5
Std nTPM: 19.1
Median nTPM: 73.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 214.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 124.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 123.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 119.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 119.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 116.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 116.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 115.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 110.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 109.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.9
FF:10169-103B7 60 years, female 95.5
FF:10153-102I9 76 years, female 62.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.3
Pig sample Sample description nTPM
Subiculum
nTPM: 50.4
Samples: 4

Max nTPM: 63.4
Min nTPM: 43.0
Sample A Female 63.4
Sample B Female 47.0
Sample C Male 43.0
Sample D Male 48.3
Dorsal hippocampus
nTPM: 75.3
Samples: 4

Max nTPM: 114.3
Min nTPM: 46.0
Sample A Female 114.3
Sample B Female 80.4
Sample C Male 60.5
Sample D Male 46.0
Entorhinal cortex
nTPM: 54.5
Samples: 4

Max nTPM: 72.3
Min nTPM: 35.5
Sample A Female 54.5
Sample B Female 72.3
Sample C Male 55.5
Sample D Male 35.5
Ventral hippocampus
nTPM: 63.4
Samples: 4

Max nTPM: 72.5
Min nTPM: 48.9
Sample A Female 72.5
Sample B Female 48.9
Sample C Male 70.7
Sample D Male 61.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.7
Samples: 4

Max nTPM: 89.2
Min nTPM: 70.5
Sample A Male 71.2
Sample B Male 75.9
Sample C Female 89.2
Sample D Female 70.5
Hippocampal formation
nTPM: 96.2
Samples: 4

Max nTPM: 113.2
Min nTPM: 89.4
Sample A Male 113.2
Sample B Male 92.0
Sample C Female 90.3
Sample D Female 89.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70295876 Antisense, RP_050531_04_B03, Mouse strain C57BL/6J (56 days, male) 0.5

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