HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:30.2 nTPM
HPA Brain:44.1 nTPM
GTEx:30.2 nTPM
FANTOM5:59.2 Scaled Tags Per Million
Pig:16.0 nTPM
Mouse:52.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019765
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.1
Sample id Sample description nTPM
Hippocampus
nTPM: 39.3
2148 Female, age 91, left hemisphere 43.8
2529 Female, age 94, left hemisphere 42.0
1855 Male, age 76, left hemisphere 39.0
1898 Male, age 80, left hemisphere 38.0
2621 Female, age 67, right hemisphere 37.3
1911 Female, age 85, right hemisphere 35.7
Dentate gyrus
nTPM: 42.1
2010 Male, age 76, both hemispheres 46.0
2530 Female, age 94, left hemisphere 44.4
2531 Female, age 67, both hemispheres 43.3
2528 Male, age 74, both hemispheres 42.3
1927 Female, age 91, both hemispheres 38.5
2246 Female, age 85, both hemispheres 37.9
Entorhinal gyrus
nTPM: 44.1
2764 Male, age 80, right hemisphere 51.8
2686 Male, age 75, right hemisphere 46.1
2613 Female, age 94, left hemisphere 43.8
1787 Male, age 76, left hemisphere 43.6
1938 Female, age 85, left hemisphere 40.6
2117 Female, age 91, right hemisphere 39.0
Hippocampus, CA1
nTPM: 42.1
2045 Male, age 76, both hemispheres 55.5
2749 Male, age 80, left hemisphere 41.2
2082 Female, age 91, right hemisphere 39.7
1873 Female, age 85, both hemispheres 37.1
2527 Male, age 74, both hemispheres 37.1
Hippocampus, CA2
nTPM: 40.8
1892 Male, age 76, both hemispheres 44.2
2437 Female, age 94, left hemisphere 43.0
1940 Female, age 85, left hemisphere 41.4
1963 Male, age 80, left hemisphere 40.8
2249 Male, age 74, both hemispheres 37.8
2113 Female, age 91, right hemisphere 37.6
Hippocampus, CA3
nTPM: 40.6
2620 Female, age 94, left hemisphere 53.2
1867 Male, age 76, both hemispheres 41.8
1891 Female, age 85, both hemispheres 40.2
2137 Male, age 80, left hemisphere 39.5
2861 Female, age 67, both hemispheres 37.8
2436 Male, age 74, both hemispheres 31.3
Parahippocampal cortex
nTPM: 41.7
2018 Male, age 76, both hemispheres 47.5
2693 Female, age 94, both hemispheres 46.1
1850 Male, age 80, both hemispheres 43.9
1990 Female, age 91, right hemisphere 42.7
2692 Male, age 74, both hemispheres 42.5
2622 Female, age 67, right hemisphere 41.3
2532 Female, age 72, left hemisphere 40.2
1933 Female, age 85, both hemispheres 40.0
2245 Female, age 91, both hemispheres 36.9
2250 Female, age 67, right hemisphere 35.4
Perirhinal gyrus
nTPM: 41.1
1794 Male, age 80, right hemisphere 45.5
2521 Female, age 94, right hemisphere 45.0
2848 Male, age 76, right hemisphere 42.2
1847 Female, age 91, left hemisphere 36.9
1841 Female, age 85, right hemisphere 36.1
Subiculum
nTPM: 42.3
2042 Male, age 76, both hemispheres 45.7
2729 Female, age 91, right hemisphere 43.8
1901 Male, age 80, both hemispheres 43.5
1977 Female, age 85, both hemispheres 42.5
2619 Male, age 74, both hemispheres 41.0
2438 Female, age 94, left hemisphere 37.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 51.0
Min nTPM: 17.5
Std nTPM: 4.6
Median nTPM: 30.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 41.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 40.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 40.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 40.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 39.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 39.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 38.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 38.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.2
FF:10169-103B7 60 years, female 67.5
FF:10153-102I9 76 years, female 50.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.0
Pig sample Sample description nTPM
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.4
Sample A Female 18.8
Sample B Female 12.9
Sample C Male 13.6
Sample D Male 12.4
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.2
Sample A Female 19.0
Sample B Female 17.1
Sample C Male 14.7
Sample D Male 13.2
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.0
Sample A Female 15.0
Sample B Female 15.0
Sample C Male 15.4
Sample D Male 12.0
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 11.0
Sample A Female 16.4
Sample B Female 11.0
Sample C Male 18.8
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 52.7
Min nTPM: 46.0
Sample A Male 52.2
Sample B Male 52.7
Sample C Female 50.1
Sample D Female 46.0
Hippocampal formation
nTPM: 53.0
Samples: 4

Max nTPM: 58.2
Min nTPM: 47.5
Sample A Male 58.2
Sample B Male 48.2
Sample C Female 47.5
Sample D Female 57.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
601190 Antisense, RP_040831_01_H09, Mouse strain C57BL/6J (56 days, male) 1.0

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