HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:118.4 nTPM
HPA Brain:85.1 nTPM
GTEx:118.4 nTPM
FANTOM5:126.1 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:147.4 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047074
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.1
Sample id Sample description nTPM
Hippocampus
nTPM: 84.7
2529 Female, age 94, left hemisphere 97.9
1898 Male, age 80, left hemisphere 94.8
1855 Male, age 76, left hemisphere 85.6
1911 Female, age 85, right hemisphere 82.1
2621 Female, age 67, right hemisphere 75.4
2148 Female, age 91, left hemisphere 72.2
Dentate gyrus
nTPM: 85.1
2530 Female, age 94, left hemisphere 121.0
2010 Male, age 76, both hemispheres 90.3
2531 Female, age 67, both hemispheres 83.9
1927 Female, age 91, both hemispheres 80.7
2528 Male, age 74, both hemispheres 68.1
2246 Female, age 85, both hemispheres 66.6
Entorhinal gyrus
nTPM: 73.6
1938 Female, age 85, left hemisphere 79.3
2117 Female, age 91, right hemisphere 78.7
2764 Male, age 80, right hemisphere 75.8
1787 Male, age 76, left hemisphere 75.7
2686 Male, age 75, right hemisphere 67.0
2613 Female, age 94, left hemisphere 65.2
Hippocampus, CA1
nTPM: 82.7
1873 Female, age 85, both hemispheres 102.7
2749 Male, age 80, left hemisphere 100.4
2045 Male, age 76, both hemispheres 73.1
2527 Male, age 74, both hemispheres 72.9
2082 Female, age 91, right hemisphere 64.3
Hippocampus, CA2
nTPM: 78.8
2437 Female, age 94, left hemisphere 99.7
1892 Male, age 76, both hemispheres 88.6
1940 Female, age 85, left hemisphere 81.6
1963 Male, age 80, left hemisphere 76.0
2113 Female, age 91, right hemisphere 66.3
2249 Male, age 74, both hemispheres 60.8
Hippocampus, CA3
nTPM: 83.2
1867 Male, age 76, both hemispheres 98.0
1891 Female, age 85, both hemispheres 90.3
2137 Male, age 80, left hemisphere 84.8
2436 Male, age 74, both hemispheres 79.4
2861 Female, age 67, both hemispheres 73.6
2620 Female, age 94, left hemisphere 73.1
Parahippocampal cortex
nTPM: 74.0
1933 Female, age 85, both hemispheres 90.2
2018 Male, age 76, both hemispheres 90.0
1850 Male, age 80, both hemispheres 88.9
2245 Female, age 91, both hemispheres 81.6
2532 Female, age 72, left hemisphere 71.2
2250 Female, age 67, right hemisphere 68.6
2622 Female, age 67, right hemisphere 68.1
2692 Male, age 74, both hemispheres 66.6
1990 Female, age 91, right hemisphere 63.2
2693 Female, age 94, both hemispheres 51.8
Perirhinal gyrus
nTPM: 79.3
1847 Female, age 91, left hemisphere 97.3
1841 Female, age 85, right hemisphere 88.1
1794 Male, age 80, right hemisphere 83.7
2521 Female, age 94, right hemisphere 67.5
2848 Male, age 76, right hemisphere 60.1
Subiculum
nTPM: 76.9
1901 Male, age 80, both hemispheres 94.3
2042 Male, age 76, both hemispheres 84.9
2438 Female, age 94, left hemisphere 84.4
1977 Female, age 85, both hemispheres 71.6
2619 Male, age 74, both hemispheres 64.3
2729 Female, age 91, right hemisphere 62.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.4
Samples: 197

Max nTPM: 265.1
Min nTPM: 57.5
Std nTPM: 29.8
Median nTPM: 113.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 265.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 212.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 208.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 201.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 199.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 197.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 194.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 180.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 180.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 177.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 169.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.1
FF:10169-103B7 60 years, female 141.2
FF:10153-102I9 76 years, female 111.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.7
Pig sample Sample description nTPM
Subiculum
nTPM: 24.0
Samples: 4

Max nTPM: 33.8
Min nTPM: 17.7
Sample A Female 33.8
Sample B Female 24.2
Sample C Male 20.2
Sample D Male 17.7
Dorsal hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 37.6
Min nTPM: 21.2
Sample A Female 37.6
Sample B Female 26.6
Sample C Male 33.2
Sample D Male 21.2
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 32.5
Min nTPM: 23.6
Sample A Female 25.5
Sample B Female 32.5
Sample C Male 24.8
Sample D Male 23.6
Ventral hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 30.9
Min nTPM: 20.2
Sample A Female 27.4
Sample B Female 20.2
Sample C Male 30.9
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 147.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.4
Samples: 4

Max nTPM: 144.0
Min nTPM: 115.9
Sample A Male 125.9
Sample B Male 144.0
Sample C Female 139.9
Sample D Female 115.9
Hippocampal formation
nTPM: 147.4
Samples: 4

Max nTPM: 163.3
Min nTPM: 140.8
Sample A Male 163.3
Sample B Male 142.9
Sample C Female 140.8
Sample D Female 142.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68341603 Antisense, RP_041207_01_H01, Mouse strain C57BL/6J (56 days, male) 3.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org