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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
131.0
nTPM
HPA Brain:
106.9
nTPM
GTEx:
131.0
nTPM
FANTOM5:
96.2
Scaled Tags Per Million
Pig:
33.8
nTPM
Mouse:
133.4
nTPM
Allen mouse:
3.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
106.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 90.6
2586
Male, age 75, left hemisphere
158.5
2411
Female, age 72, unknown
99.3
1870
Female, age 42, unknown
96.6
2019
Male, age 18, unknown
96.2
1827
Male, age 72, unknown
89.8
1830
Male, age 51, unknown
78.3
2828
Female, age 72, unknown
75.5
1833
Male, age 53, unknown
74.1
2666
Male, age 74, left hemisphere
70.4
2219
Male, age 76, both hemispheres
67.5
Dorsal raphe nucleus nTPM: 86.1
2047
Male, age 72, unknown
97.3
2016
Female, age 72, unknown
87.4
1828
Male, age 53, unknown
85.7
2298
Female, age 72, unknown
83.6
2750
Male, age 76, both hemispheres
76.6
Inferior colliculus nTPM: 78.7
1890
Male, age 53, unknown
92.9
1848
Female, age 42, unknown
79.7
2097
Female, age 72, unknown
75.5
2849
Male, age 72, unknown
66.8
Median raphe nucleus nTPM: 85.6
2220
Male, age 76, midline
85.6
Periaquaductal grey, anterior nTPM: 106.9
2502
Female, age 75, unknown
128.7
1947
Male, age 18, unknown
102.9
1795
Male, age 51, unknown
89.1
Periaquaductal grey, dorsal nTPM: 82.3
1840
Male, age 53, unknown
88.4
2850
Male, age 76, both hemispheres
84.5
1831
Male, age 72, unknown
78.5
2464
Female, age 72, unknown
78.0
Periaquaductal grey, lateral nTPM: 73.9
2053
Male, age 18, unknown
85.5
2140
Male, age 76, both hemispheres
75.1
2272
Male, age 74, both hemispheres
61.0
Pretectal area nTPM: 84.0
2007
Male, age 72, unknown
102.2
1944
Female, age 72, unknown
101.3
1816
Male, age 51, unknown
94.5
1817
Female, age 42, unknown
89.3
2667
Female, age 75, unknown
88.8
1815
Male, age 53, unknown
79.4
2224
Female, age 72, unknown
79.1
2407
Male, age 75, both hemispheres
77.5
2825
Male, age 18, unknown
75.9
2316
Male, age 76, right hemisphere
70.6
2273
Male, age 74, both hemispheres
65.0
Red nucleus nTPM: 88.3
2588
Male, age 74, left hemisphere
110.5
2503
Female, age 72, unknown
98.8
1865
Male, age 51, unknown
97.9
2584
Male, age 75, left hemisphere
97.3
1821
Female, age 72, unknown
92.6
1954
Female, age 42, unknown
89.0
2227
Male, age 72, unknown
85.4
1904
Male, age 53, unknown
83.0
2785
Male, age 18, unknown
80.8
2769
Male, age 72, unknown
80.2
2823
Male, age 76, right hemisphere
73.2
2725
Female, age 75, unknown
70.9
Substantia nigra nTPM: 91.6
1916
Female, age 42, unknown
107.1
1851
Male, age 51, unknown
106.1
1889
Female, age 72, unknown
106.1
2590
Female, age 75, unknown
96.6
2583
Male, age 75, right hemisphere
96.1
2699
Male, age 18, unknown
85.9
2241
Male, age 72, unknown
85.0
1941
Male, age 53, unknown
82.6
2409
Female, age 72, unknown
81.6
2665
Male, age 74, both hemispheres
69.0
Superior colliculus nTPM: 81.4
2587
Male, age 74, left hemisphere
90.7
1895
Male, age 76, right hemisphere
87.8
2664
Male, age 75, both hemispheres
85.5
1796
Male, age 53, unknown
85.0
1913
Female, age 42, unknown
83.9
1995
Male, age 72, unknown
83.6
2261
Male, age 18, unknown
81.8
2668
Female, age 75, unknown
72.4
2087
Female, age 72, unknown
72.2
1839
Male, age 51, unknown
71.1
Ventral tegmental area nTPM: 89.3
2021
Male, age 53, unknown
96.1
2410
Female, age 72, unknown
94.7
1915
Female, age 42, unknown
92.8
1942
Male, age 51, unknown
91.1
2218
Male, age 76, both hemispheres
82.1
2223
Female, age 72, unknown
78.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
131.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 131.0
Samples: 139
Max nTPM: 214.4
Min nTPM: 81.7
Std nTPM: 27.4
Median nTPM: 125.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
214.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
211.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
206.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
204.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
202.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
189.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
189.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
189.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
182.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
171.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
170.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
170.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
169.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
169.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
167.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
165.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
162.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
162.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
160.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
159.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
159.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
157.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
156.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
154.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
152.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
152.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
150.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
149.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
148.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
148.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
147.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
146.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
145.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
144.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
144.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
144.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
144.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
143.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
143.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
143.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
142.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
141.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
141.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
140.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
139.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
139.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
139.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
139.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
137.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
137.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
137.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
136.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
136.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
136.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
135.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
135.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
135.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
135.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
134.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
131.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
131.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
131.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
130.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
128.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
127.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
127.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
126.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
126.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
125.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
125.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
125.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
125.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
125.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
125.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
124.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
124.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
124.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
124.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
123.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
123.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
123.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
123.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
122.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
120.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
119.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
119.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
118.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
118.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
118.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
117.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
117.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
117.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
117.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
115.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
115.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
115.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
114.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
114.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
114.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
114.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
113.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
113.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
113.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
113.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
112.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
112.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
111.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
111.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
111.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
110.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
110.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
110.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
109.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
109.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
109.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
109.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
108.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
108.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
105.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
103.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
103.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
102.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
101.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
100.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
100.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
99.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
96.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
96.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
95.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
91.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
91.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
90.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
90.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
89.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
89.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
87.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
84.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
82.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
81.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
133.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 133.4
Samples: 4
Max nTPM: 143.3
Min nTPM: 124.3
Sample A
Male
143.3
Sample B
Male
124.3
Sample C
Female
124.5
Sample D
Female
141.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.