HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:51.0 nTPM
HPA Brain:96.6 nTPM
GTEx:51.0 nTPM
FANTOM5:121.0 Scaled Tags Per Million
Mouse:196.2 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.6
Sample id Sample description nTPM
Hippocampus
nTPM: 83.0
1898 Male, age 80, left hemisphere 89.7
1855 Male, age 76, left hemisphere 88.6
2621 Female, age 67, right hemisphere 87.9
2148 Female, age 91, left hemisphere 81.4
2529 Female, age 94, left hemisphere 78.5
1911 Female, age 85, right hemisphere 71.6
Dentate gyrus
nTPM: 71.0
1927 Female, age 91, both hemispheres 94.9
2246 Female, age 85, both hemispheres 79.6
2010 Male, age 76, both hemispheres 74.8
2531 Female, age 67, both hemispheres 62.4
2528 Male, age 74, both hemispheres 59.8
2530 Female, age 94, left hemisphere 54.3
Entorhinal gyrus
nTPM: 73.0
1938 Female, age 85, left hemisphere 82.5
2764 Male, age 80, right hemisphere 76.2
2613 Female, age 94, left hemisphere 75.0
1787 Male, age 76, left hemisphere 72.4
2686 Male, age 75, right hemisphere 69.6
2117 Female, age 91, right hemisphere 62.2
Hippocampus, CA1
nTPM: 88.1
2749 Male, age 80, left hemisphere 121.5
1873 Female, age 85, both hemispheres 86.3
2527 Male, age 74, both hemispheres 86.1
2045 Male, age 76, both hemispheres 74.5
2082 Female, age 91, right hemisphere 72.3
Hippocampus, CA2
nTPM: 75.2
1892 Male, age 76, both hemispheres 91.8
1963 Male, age 80, left hemisphere 81.4
1940 Female, age 85, left hemisphere 74.0
2249 Male, age 74, both hemispheres 71.7
2113 Female, age 91, right hemisphere 70.9
2437 Female, age 94, left hemisphere 61.4
Hippocampus, CA3
nTPM: 79.3
2137 Male, age 80, left hemisphere 104.3
2436 Male, age 74, both hemispheres 85.3
2620 Female, age 94, left hemisphere 74.3
1867 Male, age 76, both hemispheres 72.5
2861 Female, age 67, both hemispheres 70.8
1891 Female, age 85, both hemispheres 68.8
Parahippocampal cortex
nTPM: 85.6
2245 Female, age 91, both hemispheres 102.3
2250 Female, age 67, right hemisphere 95.8
2693 Female, age 94, both hemispheres 94.3
1850 Male, age 80, both hemispheres 93.5
2622 Female, age 67, right hemisphere 86.3
1933 Female, age 85, both hemispheres 83.1
2532 Female, age 72, left hemisphere 81.7
1990 Female, age 91, right hemisphere 78.7
2692 Male, age 74, both hemispheres 78.7
2018 Male, age 76, both hemispheres 62.1
Perirhinal gyrus
nTPM: 96.6
1847 Female, age 91, left hemisphere 108.4
2521 Female, age 94, right hemisphere 105.8
1794 Male, age 80, right hemisphere 96.3
1841 Female, age 85, right hemisphere 93.4
2848 Male, age 76, right hemisphere 79.0
Subiculum
nTPM: 75.3
2438 Female, age 94, left hemisphere 100.3
2619 Male, age 74, both hemispheres 80.6
1901 Male, age 80, both hemispheres 73.9
1977 Female, age 85, both hemispheres 71.9
2729 Female, age 91, right hemisphere 64.2
2042 Male, age 76, both hemispheres 61.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.0
Samples: 197

Max nTPM: 105.9
Min nTPM: 18.0
Std nTPM: 19.0
Median nTPM: 46.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 105.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 104.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 97.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 92.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 91.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 90.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 89.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 88.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 87.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 86.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.0
FF:10169-103B7 60 years, female 141.2
FF:10153-102I9 76 years, female 100.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 196.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 196.2
Samples: 4

Max nTPM: 215.1
Min nTPM: 187.8
Sample A Male 187.8
Sample B Male 188.5
Sample C Female 193.5
Sample D Female 215.1
Hippocampal formation
nTPM: 182.6
Samples: 4

Max nTPM: 195.5
Min nTPM: 174.9
Sample A Male 195.5
Sample B Male 179.5
Sample C Female 174.9
Sample D Female 180.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
67979036 Antisense, RP_040923_02_B06, Mouse strain C57BL/6J (56 days, male) 6.2

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