HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:36.0 nTPM
HPA Brain:9.4 nTPM
GTEx:36.0 nTPM
FANTOM5:99.8 Scaled Tags Per Million
Pig:47.5 nTPM
Mouse:47.0 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017961
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.4
Sample id Sample description nTPM
Hippocampus
nTPM: 9.4
1855 Male, age 76, left hemisphere 13.8
1898 Male, age 80, left hemisphere 12.4
2148 Female, age 91, left hemisphere 8.9
2529 Female, age 94, left hemisphere 8.7
1911 Female, age 85, right hemisphere 7.5
2621 Female, age 67, right hemisphere 5.3
Dentate gyrus
nTPM: 9.3
2528 Male, age 74, both hemispheres 13.7
2010 Male, age 76, both hemispheres 12.1
1927 Female, age 91, both hemispheres 9.5
2530 Female, age 94, left hemisphere 7.8
2246 Female, age 85, both hemispheres 6.4
2531 Female, age 67, both hemispheres 6.4
Entorhinal gyrus
nTPM: 7.7
1938 Female, age 85, left hemisphere 11.5
2613 Female, age 94, left hemisphere 9.8
1787 Male, age 76, left hemisphere 7.5
2117 Female, age 91, right hemisphere 7.2
2764 Male, age 80, right hemisphere 6.3
2686 Male, age 75, right hemisphere 4.0
Hippocampus, CA1
nTPM: 8.9
1873 Female, age 85, both hemispheres 13.5
2749 Male, age 80, left hemisphere 12.9
2082 Female, age 91, right hemisphere 7.5
2527 Male, age 74, both hemispheres 5.6
2045 Male, age 76, both hemispheres 5.2
Hippocampus, CA2
nTPM: 8.5
2249 Male, age 74, both hemispheres 11.5
1963 Male, age 80, left hemisphere 8.8
1940 Female, age 85, left hemisphere 8.7
1892 Male, age 76, both hemispheres 7.7
2437 Female, age 94, left hemisphere 7.4
2113 Female, age 91, right hemisphere 6.8
Hippocampus, CA3
nTPM: 9.4
2436 Male, age 74, both hemispheres 13.2
2137 Male, age 80, left hemisphere 10.5
1891 Female, age 85, both hemispheres 10.1
1867 Male, age 76, both hemispheres 9.9
2861 Female, age 67, both hemispheres 6.3
2620 Female, age 94, left hemisphere 6.2
Parahippocampal cortex
nTPM: 8.5
1990 Female, age 91, right hemisphere 12.5
2692 Male, age 74, both hemispheres 11.0
2250 Female, age 67, right hemisphere 9.6
2018 Male, age 76, both hemispheres 9.5
2693 Female, age 94, both hemispheres 9.1
2532 Female, age 72, left hemisphere 8.7
2622 Female, age 67, right hemisphere 8.0
1933 Female, age 85, both hemispheres 6.3
1850 Male, age 80, both hemispheres 6.0
2245 Female, age 91, both hemispheres 4.5
Perirhinal gyrus
nTPM: 8.9
1794 Male, age 80, right hemisphere 10.7
1841 Female, age 85, right hemisphere 10.6
1847 Female, age 91, left hemisphere 9.5
2848 Male, age 76, right hemisphere 7.2
2521 Female, age 94, right hemisphere 6.6
Subiculum
nTPM: 9.2
2438 Female, age 94, left hemisphere 16.3
1901 Male, age 80, both hemispheres 10.5
2729 Female, age 91, right hemisphere 8.5
2619 Male, age 74, both hemispheres 7.5
2042 Male, age 76, both hemispheres 7.3
1977 Female, age 85, both hemispheres 5.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.0
Samples: 197

Max nTPM: 59.5
Min nTPM: 22.9
Std nTPM: 7.3
Median nTPM: 34.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 58.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 56.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 56.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 55.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 52.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 51.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 51.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 50.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 50.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.8
FF:10153-102I9 76 years, female 103.0
FF:10169-103B7 60 years, female 96.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.5
Pig sample Sample description nTPM
Subiculum
nTPM: 39.3
Samples: 4

Max nTPM: 46.8
Min nTPM: 33.9
Sample A Female 46.8
Sample B Female 37.5
Sample C Male 33.9
Sample D Male 39.0
Dorsal hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 56.8
Min nTPM: 35.8
Sample A Female 56.8
Sample B Female 43.6
Sample C Male 53.6
Sample D Male 35.8
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 41.6
Min nTPM: 33.3
Sample A Female 38.2
Sample B Female 41.6
Sample C Male 35.9
Sample D Male 33.3
Ventral hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 44.0
Min nTPM: 34.5
Sample A Female 40.4
Sample B Female 34.5
Sample C Male 37.7
Sample D Male 44.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 46.8
Min nTPM: 41.0
Sample A Male 42.5
Sample B Male 46.8
Sample C Female 42.0
Sample D Female 41.0
Hippocampal formation
nTPM: 47.0
Samples: 4

Max nTPM: 48.9
Min nTPM: 45.1
Sample A Male 45.1
Sample B Male 45.3
Sample C Female 48.9
Sample D Female 48.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68546374 Antisense, RP_050120_02_D05, Mouse strain C57BL/6J (56 days, male) 3.8

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