HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:90.1 nTPM
HPA Brain:121.8 nTPM
GTEx:90.1 nTPM
FANTOM5:172.2 Scaled Tags Per Million
Pig:37.4 nTPM
Mouse:24.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031085Antibody HPA053694
Glial cells MediumNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.8
Sample id Sample description nTPM
Hippocampus
nTPM: 115.1
1911 Female, age 85, right hemisphere 141.3
1898 Male, age 80, left hemisphere 119.4
2529 Female, age 94, left hemisphere 117.1
2148 Female, age 91, left hemisphere 113.3
1855 Male, age 76, left hemisphere 110.4
2621 Female, age 67, right hemisphere 89.1
Dentate gyrus
nTPM: 94.8
2528 Male, age 74, both hemispheres 143.3
2530 Female, age 94, left hemisphere 101.8
2010 Male, age 76, both hemispheres 92.6
2246 Female, age 85, both hemispheres 79.5
2531 Female, age 67, both hemispheres 76.7
1927 Female, age 91, both hemispheres 74.8
Entorhinal gyrus
nTPM: 96.0
2117 Female, age 91, right hemisphere 171.5
1787 Male, age 76, left hemisphere 113.0
2764 Male, age 80, right hemisphere 78.9
2686 Male, age 75, right hemisphere 78.4
1938 Female, age 85, left hemisphere 76.5
2613 Female, age 94, left hemisphere 57.6
Hippocampus, CA1
nTPM: 96.1
2082 Female, age 91, right hemisphere 152.7
1873 Female, age 85, both hemispheres 124.7
2527 Male, age 74, both hemispheres 88.8
2045 Male, age 76, both hemispheres 79.6
2749 Male, age 80, left hemisphere 34.7
Hippocampus, CA2
nTPM: 105.2
2113 Female, age 91, right hemisphere 156.1
2249 Male, age 74, both hemispheres 119.5
1963 Male, age 80, left hemisphere 98.6
2437 Female, age 94, left hemisphere 97.0
1940 Female, age 85, left hemisphere 93.8
1892 Male, age 76, both hemispheres 65.9
Hippocampus, CA3
nTPM: 84.4
1891 Female, age 85, both hemispheres 126.9
2620 Female, age 94, left hemisphere 96.6
2436 Male, age 74, both hemispheres 81.5
2861 Female, age 67, both hemispheres 77.4
1867 Male, age 76, both hemispheres 75.1
2137 Male, age 80, left hemisphere 48.6
Parahippocampal cortex
nTPM: 89.4
1990 Female, age 91, right hemisphere 121.6
2018 Male, age 76, both hemispheres 116.9
2692 Male, age 74, both hemispheres 94.5
2245 Female, age 91, both hemispheres 91.9
2532 Female, age 72, left hemisphere 86.4
1850 Male, age 80, both hemispheres 79.7
2622 Female, age 67, right hemisphere 78.5
2250 Female, age 67, right hemisphere 76.8
1933 Female, age 85, both hemispheres 74.1
2693 Female, age 94, both hemispheres 73.5
Perirhinal gyrus
nTPM: 84.3
2521 Female, age 94, right hemisphere 106.5
1847 Female, age 91, left hemisphere 85.4
1841 Female, age 85, right hemisphere 78.6
1794 Male, age 80, right hemisphere 76.8
2848 Male, age 76, right hemisphere 74.1
Subiculum
nTPM: 121.8
2729 Female, age 91, right hemisphere 166.3
2042 Male, age 76, both hemispheres 151.1
1901 Male, age 80, both hemispheres 123.4
2619 Male, age 74, both hemispheres 112.0
2438 Female, age 94, left hemisphere 89.8
1977 Female, age 85, both hemispheres 88.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.1
Samples: 197

Max nTPM: 329.9
Min nTPM: 18.1
Std nTPM: 59.7
Median nTPM: 68.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 329.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 323.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 292.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 285.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 284.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 260.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 226.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 225.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 221.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 219.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 214.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 172.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 172.2
FF:10153-102I9 76 years, female 218.8
FF:10169-103B7 60 years, female 125.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.4
Pig sample Sample description nTPM
Subiculum
nTPM: 37.4
Samples: 4

Max nTPM: 55.2
Min nTPM: 26.9
Sample A Female 36.1
Sample B Female 26.9
Sample C Male 31.5
Sample D Male 55.2
Dorsal hippocampus
nTPM: 35.4
Samples: 4

Max nTPM: 48.4
Min nTPM: 17.5
Sample A Female 41.2
Sample B Female 34.5
Sample C Male 48.4
Sample D Male 17.5
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 45.1
Min nTPM: 11.9
Sample A Female 45.1
Sample B Female 30.0
Sample C Male 32.2
Sample D Male 11.9
Ventral hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 46.5
Min nTPM: 28.3
Sample A Female 33.0
Sample B Female 28.3
Sample C Male 46.5
Sample D Male 31.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 30.5
Min nTPM: 19.4
Sample A Male 19.8
Sample B Male 19.4
Sample C Female 26.3
Sample D Female 30.5
Hippocampal formation
nTPM: 22.5
Samples: 4

Max nTPM: 30.2
Min nTPM: 16.9
Sample A Male 16.9
Sample B Male 20.5
Sample C Female 22.5
Sample D Female 30.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68302041 Antisense, RP_041130_02_C08, Mouse strain C57BL/6J (56 days, male) 0.7
1085 Antisense, RP_Baylor_103215, Mouse strain C57BL/6J (56 days, male) 0.3
1084 Antisense, RP_Baylor_103215, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org