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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
179.4
nTPM
FANTOM5:
154.7
Scaled Tags Per Million
Pig:
57.3
nTPM
Allen mouse:
0.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
179.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 155.5
2090
Male, age 80, both hemispheres
186.4
2301
Female, age 85, both hemispheres
152.8
1984
Male, age 76, both hemispheres
152.5
2188
Female, age 91, both hemispheres
130.2
Dorsal cochlear nucleus nTPM: 112.3
2378
Male, age 80, both hemispheres
162.8
2802
Male, age 74, right hemisphere
106.0
2370
Male, age 61, both hemispheres
104.5
2187
Female, age 91, both hemispheres
95.3
2058
Male, age 76, both hemispheres
93.0
Dorsal tegmental nucleus nTPM: 128.6
2358
Male, age 61, both hemispheres
169.6
2326
Male, age 74, both hemispheres
125.2
1936
Male, age 76, left hemisphere
123.1
2083
Male, age 80, both hemispheres
96.7
Dorsolateral tegmental area nTPM: 179.4
2337
Male, age 61, both hemispheres
440.3
2360
Male, age 74, both hemispheres
156.8
2654
Male, age 80, both hemispheres
112.0
2751
Female, age 85, both hemispheres
99.9
2141
Male, age 76, both hemispheres
87.9
Kolliker-Fuse nucleus nTPM: 153.2
2315
Male, age 76, right hemisphere
263.4
2793
Female, age 91, left hemisphere
105.2
2163
Male, age 80, both hemispheres
91.1
Lateral lemniscal nuclei nTPM: 110.6
2746
Female, age 85, left hemisphere
139.9
2036
Male, age 80, both hemispheres
117.4
2320
Female, age 91, left hemisphere
114.5
2453
Male, age 74, right hemisphere
91.3
2169
Male, age 76, both hemispheres
90.0
Lateral parabrachial nucleus nTPM: 171.9
2792
Male, age 76, both hemispheres
220.1
2139
Female, age 85, right hemisphere
198.4
2013
Male, age 80, both hemispheres
191.6
2790
Male, age 61, both hemispheres
77.4
Lateral vestibular nucleus nTPM: 117.5
2311
Male, age 80, both hemispheres
150.2
2184
Male, age 76, both hemispheres
84.9
Locus coeruleus nTPM: 83.9
2317
Female, age 72, unknown
110.3
2720
Male, age 74, both hemispheres
96.8
2788
Male, age 74, unknown
91.5
2162
Male, age 80, both hemispheres
82.2
2123
Female, age 91, both hemispheres
72.1
2014
Male, age 55, unknown
68.9
1980
Male, age 76, both hemispheres
65.7
Medial parabrachial nucleus nTPM: 94.6
2854
Male, age 80, both hemispheres
133.1
2463
Female, age 85, right hemisphere
100.0
2786
Male, age 76, both hemispheres
95.2
2170
Female, age 91, both hemispheres
88.7
2156
Male, age 61, both hemispheres
55.9
Medial periolivary nuclei nTPM: 135.3
2081
Male, age 80, both hemispheres
206.6
2791
Male, age 74, right hemisphere
141.0
2063
Male, age 76, both hemispheres
136.3
2458
Female, age 91, both hemispheres
109.8
2171
Female, age 85, both hemispheres
82.8
Motor facial nucleus nTPM: 129.6
2697
Female, age 85, both hemispheres
162.6
2126
Male, age 61, both hemispheres
149.5
2365
Male, age 74, right hemisphere
141.8
2795
Female, age 91, both hemispheres
125.5
2062
Male, age 76, both hemispheres
105.5
2327
Male, age 80, both hemispheres
92.7
Motor trigeminal nucleus nTPM: 113.0
2079
Male, age 80, both hemispheres
129.4
2560
Male, age 74, both hemispheres
123.0
2335
Male, age 61, both hemispheres
121.6
2321
Female, age 91, both hemispheres
104.8
2309
Male, age 76, both hemispheres
86.2
Nuclei of the trapezoid body nTPM: 107.0
2166
Male, age 80, both hemispheres
136.0
1983
Male, age 76, both hemispheres
119.9
2368
Female, age 91, both hemispheres
104.4
2159
Male, age 61, both hemispheres
88.4
2735
Female, age 85, both hemispheres
86.2
Nucleus raphe magnus nTPM: 103.7
2051
Male, age 76, both hemispheres
148.1
2328
Male, age 80, both hemispheres
117.5
2455
Male, age 74, both hemispheres
109.1
2459
Female, age 91, both hemispheres
103.6
2172
Female, age 85, both hemispheres
75.8
2160
Male, age 61, both hemispheres
68.3
Paramedian reticular nucleus nTPM: 100.9
2052
Male, age 76, both hemispheres
111.9
2050
Female, age 85, both hemispheres
105.5
2057
Male, age 80, both hemispheres
103.4
2313
Male, age 61, both hemispheres
83.0
Pedunculopontine tegmental nucleus nTPM: 177.4
2338
Male, age 61, both hemispheres
340.9
2334
Male, age 80, both hemispheres
105.5
1921
Female, age 85, both hemispheres
85.8
Pontine nuclei nTPM: 123.3
2115
Male, age 80, left hemisphere
152.6
2454
Male, age 74, left hemisphere
137.1
2109
Female, age 72, unknown
136.3
1863
Male, age 55, unknown
135.4
2319
Female, age 91, both hemispheres
130.0
1968
Male, age 76, left hemisphere
106.8
2787
Female, age 85, both hemispheres
98.6
2727
Male, age 61, right hemisphere
89.3
Pontine raphe nucleus nTPM: 98.7
2122
Female, age 85, midline
108.5
2853
Male, age 76, midline
89.0
Posteroventral cochlear nucleus nTPM: 134.3
2341
Male, age 80, both hemispheres
172.6
2371
Male, age 61, both hemispheres
151.1
2135
Female, age 91, both hemispheres
139.9
2070
Male, age 76, both hemispheres
107.3
2752
Female, age 85, both hemispheres
100.5
Principal sensory trigeminal nucleus nTPM: 94.3
2367
Female, age 91, left hemisphere
114.6
2008
Male, age 80, left hemisphere
96.3
2324
Male, age 76, both hemispheres
89.8
2158
Male, age 61, both hemispheres
76.7
Reticular pontine nucleus, caudal nTPM: 119.2
2092
Male, age 76, both hemispheres
146.1
2457
Female, age 91, both hemispheres
126.7
2559
Male, age 74, both hemispheres
109.5
2332
Male, age 80, right hemisphere
94.7
Reticular pontine nucleus, oral nTPM: 117.2
2366
Female, age 91, both hemispheres
147.7
2361
Male, age 74, both hemispheres
127.8
2012
Female, age 85, both hemispheres
115.4
1939
Male, age 80, both hemispheres
97.6
2167
Male, age 76, both hemispheres
97.3
Reticulotegmental nucleus nTPM: 83.2
2452
Male, age 74, both hemispheres
103.7
2333
Male, age 80, both hemispheres
95.7
2322
Female, age 91, both hemispheres
69.1
2325
Male, age 76, both hemispheres
64.2
Spinal trigeminal nucleus, oral nTPM: 104.1
2164
Male, age 80, both hemispheres
112.0
1978
Male, age 76, both hemispheres
111.7
2737
Female, age 85, both hemispheres
88.5
Subcoeruleus area nTPM: 97.6
2369
Female, age 85, left hemisphere
126.3
2451
Male, age 74, both hemispheres
119.4
1958
Male, age 80, both hemispheres
94.5
2089
Male, age 76, left hemisphere
93.9
2323
Female, age 91, left hemisphere
54.1
Superior olive nTPM: 126.6
2364
Male, age 74, right hemisphere
154.9
2329
Male, age 80, right hemisphere
133.5
2020
Male, age 76, both hemispheres
130.9
1875
Female, age 85, both hemispheres
118.3
2561
Female, age 91, both hemispheres
95.3
Ventral periolivary nuclei nTPM: 108.9
2023
Male, age 76, both hemispheres
135.7
2130
Female, age 85, both hemispheres
119.2
2165
Male, age 80, both hemispheres
101.9
2794
Female, age 91, left hemisphere
78.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 169.6
2359
Male, age 61, both hemispheres
324.4
2161
Male, age 80, both hemispheres
186.6
2840
Female, age 85, both hemispheres
140.5
1959
Male, age 76, both hemispheres
135.5
2456
Female, age 91, both hemispheres
123.3
2449
Male, age 74, both hemispheres
107.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
57.3
Pig sample
Sample description
nTPM
Pons nTPM: 57.3
Samples: 4
Max nTPM: 64.8
Min nTPM: 47.6
Sample A
Female
64.8
Sample B
Female
47.6
Sample C
Male
64.8
Sample D
Male
52.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
