We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
100.4
nTPM
HPA Brain:
140.2
nTPM
GTEx:
100.4
nTPM
FANTOM5:
267.1
Scaled Tags Per Million
Pig:
151.1
nTPM
Mouse:
22.4
nTPM
Allen mouse:
0.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
140.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 132.6
1870
Female, age 42, unknown
183.8
1830
Male, age 51, unknown
165.6
2828
Female, age 72, unknown
158.6
2411
Female, age 72, unknown
142.3
1833
Male, age 53, unknown
134.7
2019
Male, age 18, unknown
125.0
2219
Male, age 76, both hemispheres
124.7
1827
Male, age 72, unknown
113.5
2666
Male, age 74, left hemisphere
109.0
2586
Male, age 75, left hemisphere
68.3
Dorsal raphe nucleus nTPM: 127.9
2016
Female, age 72, unknown
205.9
2298
Female, age 72, unknown
145.4
1828
Male, age 53, unknown
115.7
2750
Male, age 76, both hemispheres
110.2
2047
Male, age 72, unknown
62.5
Inferior colliculus nTPM: 96.5
1890
Male, age 53, unknown
108.1
1848
Female, age 42, unknown
102.5
2849
Male, age 72, unknown
92.3
2097
Female, age 72, unknown
83.1
Median raphe nucleus nTPM: 71.3
2220
Male, age 76, midline
71.3
Periaquaductal grey, anterior nTPM: 103.8
1947
Male, age 18, unknown
124.8
1795
Male, age 51, unknown
98.8
2502
Female, age 75, unknown
87.8
Periaquaductal grey, dorsal nTPM: 122.9
1831
Male, age 72, unknown
160.1
2850
Male, age 76, both hemispheres
121.6
2464
Female, age 72, unknown
120.7
1840
Male, age 53, unknown
89.4
Periaquaductal grey, lateral nTPM: 132.1
2140
Male, age 76, both hemispheres
145.5
2272
Male, age 74, both hemispheres
131.5
2053
Male, age 18, unknown
119.3
Pretectal area nTPM: 111.1
2316
Male, age 76, right hemisphere
168.2
2273
Male, age 74, both hemispheres
149.0
1815
Male, age 53, unknown
135.2
2224
Female, age 72, unknown
126.4
2667
Female, age 75, unknown
118.3
2825
Male, age 18, unknown
109.8
2407
Male, age 75, both hemispheres
105.0
1817
Female, age 42, unknown
92.2
2007
Male, age 72, unknown
79.2
1944
Female, age 72, unknown
71.4
1816
Male, age 51, unknown
67.4
Red nucleus nTPM: 135.9
1865
Male, age 51, unknown
158.8
2785
Male, age 18, unknown
149.8
2227
Male, age 72, unknown
148.4
2769
Male, age 72, unknown
148.0
1904
Male, age 53, unknown
145.1
1954
Female, age 42, unknown
143.2
2503
Female, age 72, unknown
142.6
2725
Female, age 75, unknown
132.7
2823
Male, age 76, right hemisphere
132.5
1821
Female, age 72, unknown
120.1
2584
Male, age 75, left hemisphere
114.6
2588
Male, age 74, left hemisphere
95.2
Substantia nigra nTPM: 128.9
2699
Male, age 18, unknown
177.6
2409
Female, age 72, unknown
165.5
1851
Male, age 51, unknown
149.1
2590
Female, age 75, unknown
141.4
2583
Male, age 75, right hemisphere
139.4
2665
Male, age 74, both hemispheres
139.3
2241
Male, age 72, unknown
123.8
1941
Male, age 53, unknown
95.2
1889
Female, age 72, unknown
83.3
1916
Female, age 42, unknown
74.5
Superior colliculus nTPM: 140.2
1995
Male, age 72, unknown
246.1
1913
Female, age 42, unknown
244.1
1839
Male, age 51, unknown
135.6
1895
Male, age 76, right hemisphere
133.8
2587
Male, age 74, left hemisphere
126.7
2668
Female, age 75, unknown
123.5
1796
Male, age 53, unknown
115.9
2087
Female, age 72, unknown
107.1
2664
Male, age 75, both hemispheres
94.8
2261
Male, age 18, unknown
74.8
Ventral tegmental area nTPM: 132.2
2021
Male, age 53, unknown
165.7
2410
Female, age 72, unknown
161.8
2218
Male, age 76, both hemispheres
119.0
2223
Female, age 72, unknown
118.2
1915
Female, age 42, unknown
114.6
1942
Male, age 51, unknown
113.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
100.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 100.4
Samples: 139
Max nTPM: 354.0
Min nTPM: 32.7
Std nTPM: 50.7
Median nTPM: 88.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
354.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
255.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
244.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
237.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
205.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
204.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
193.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
188.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
186.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
175.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
175.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
173.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
170.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
168.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
166.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
164.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
159.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
156.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
150.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
149.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
149.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
147.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
147.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
145.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
144.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
143.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
136.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
136.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
136.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
134.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
131.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
129.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
125.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
124.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
124.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
121.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
120.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
118.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
116.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
116.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
116.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
116.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
114.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
114.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
113.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
112.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
111.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
111.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
108.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
107.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
106.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
105.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
104.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
104.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
103.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
102.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
102.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
102.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
101.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
100.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
99.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
99.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
99.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
95.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
92.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
92.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
92.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
90.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
89.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
88.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
88.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
86.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
85.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
85.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
84.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
84.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
83.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
80.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
80.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
79.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
79.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
78.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
76.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
76.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
75.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
74.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
74.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
73.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
72.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
72.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
72.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
71.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
71.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
71.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
71.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
70.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
69.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
68.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
67.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
67.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
65.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
64.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
64.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
64.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
63.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
63.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
61.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
61.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
60.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
59.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
59.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
59.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
58.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
58.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
56.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
56.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
56.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
55.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
55.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
53.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
53.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
52.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
51.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
51.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
48.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
47.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
46.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
46.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
45.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
43.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
43.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
42.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
41.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
39.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
39.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
38.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
37.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
33.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
32.7
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
22.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 22.4
Samples: 4
Max nTPM: 25.9
Min nTPM: 19.4
Sample A
Male
19.4
Sample B
Male
21.3
Sample C
Female
23.1
Sample D
Female
25.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.