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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
47.4
nTPM
FANTOM5:
19.8
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
47.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 47.4
1984
Male, age 76, both hemispheres
74.2
2188
Female, age 91, both hemispheres
44.0
2090
Male, age 80, both hemispheres
42.7
2301
Female, age 85, both hemispheres
28.4
Dorsal cochlear nucleus nTPM: 23.8
2187
Female, age 91, both hemispheres
32.6
2378
Male, age 80, both hemispheres
25.3
2802
Male, age 74, right hemisphere
24.9
2058
Male, age 76, both hemispheres
18.3
2370
Male, age 61, both hemispheres
17.8
Dorsal tegmental nucleus nTPM: 26.6
2326
Male, age 74, both hemispheres
32.9
2083
Male, age 80, both hemispheres
25.5
1936
Male, age 76, left hemisphere
24.4
2358
Male, age 61, both hemispheres
23.6
Dorsolateral tegmental area nTPM: 31.9
2360
Male, age 74, both hemispheres
43.7
2141
Male, age 76, both hemispheres
33.6
2337
Male, age 61, both hemispheres
32.6
2654
Male, age 80, both hemispheres
25.4
2751
Female, age 85, both hemispheres
24.5
Kolliker-Fuse nucleus nTPM: 25.8
2793
Female, age 91, left hemisphere
28.4
2163
Male, age 80, both hemispheres
24.6
2315
Male, age 76, right hemisphere
24.4
Lateral lemniscal nuclei nTPM: 22.8
2453
Male, age 74, right hemisphere
29.9
2320
Female, age 91, left hemisphere
26.9
2169
Male, age 76, both hemispheres
24.0
2746
Female, age 85, left hemisphere
18.0
2036
Male, age 80, both hemispheres
15.2
Lateral parabrachial nucleus nTPM: 24.3
2139
Female, age 85, right hemisphere
31.4
2792
Male, age 76, both hemispheres
29.2
2013
Male, age 80, both hemispheres
22.2
2790
Male, age 61, both hemispheres
14.3
Lateral vestibular nucleus nTPM: 27.3
2311
Male, age 80, both hemispheres
36.6
2184
Male, age 76, both hemispheres
18.1
Locus coeruleus nTPM: 33.0
2720
Male, age 74, both hemispheres
42.1
2317
Female, age 72, unknown
35.7
2123
Female, age 91, both hemispheres
34.2
2162
Male, age 80, both hemispheres
32.2
2014
Male, age 55, unknown
30.4
2788
Male, age 74, unknown
28.3
1980
Male, age 76, both hemispheres
28.2
Medial parabrachial nucleus nTPM: 24.8
2170
Female, age 91, both hemispheres
33.4
2854
Male, age 80, both hemispheres
28.1
2463
Female, age 85, right hemisphere
26.2
2786
Male, age 76, both hemispheres
21.3
2156
Male, age 61, both hemispheres
15.1
Medial periolivary nuclei nTPM: 32.0
2791
Male, age 74, right hemisphere
60.4
2081
Male, age 80, both hemispheres
27.5
2458
Female, age 91, both hemispheres
27.3
2063
Male, age 76, both hemispheres
25.2
2171
Female, age 85, both hemispheres
19.4
Motor facial nucleus nTPM: 23.0
2365
Male, age 74, right hemisphere
47.8
2697
Female, age 85, both hemispheres
24.4
2126
Male, age 61, both hemispheres
18.0
2062
Male, age 76, both hemispheres
17.5
2795
Female, age 91, both hemispheres
16.6
2327
Male, age 80, both hemispheres
13.9
Motor trigeminal nucleus nTPM: 28.3
2560
Male, age 74, both hemispheres
35.3
2335
Male, age 61, both hemispheres
31.6
2321
Female, age 91, both hemispheres
29.4
2079
Male, age 80, both hemispheres
23.0
2309
Male, age 76, both hemispheres
22.3
Nuclei of the trapezoid body nTPM: 21.4
1983
Male, age 76, both hemispheres
27.7
2159
Male, age 61, both hemispheres
24.2
2166
Male, age 80, both hemispheres
20.9
2735
Female, age 85, both hemispheres
17.0
2368
Female, age 91, both hemispheres
16.9
Nucleus raphe magnus nTPM: 22.0
2455
Male, age 74, both hemispheres
33.8
2051
Male, age 76, both hemispheres
20.7
2459
Female, age 91, both hemispheres
20.7
2160
Male, age 61, both hemispheres
20.1
2172
Female, age 85, both hemispheres
18.5
2328
Male, age 80, both hemispheres
18.1
Paramedian reticular nucleus nTPM: 20.0
2057
Male, age 80, both hemispheres
25.0
2050
Female, age 85, both hemispheres
21.1
2313
Male, age 61, both hemispheres
18.4
2052
Male, age 76, both hemispheres
15.6
Pedunculopontine tegmental nucleus nTPM: 28.9
2338
Male, age 61, both hemispheres
35.5
1921
Female, age 85, both hemispheres
27.3
2334
Male, age 80, both hemispheres
23.8
Pontine nuclei nTPM: 27.3
2109
Female, age 72, unknown
44.8
2454
Male, age 74, left hemisphere
33.4
2319
Female, age 91, both hemispheres
32.1
1863
Male, age 55, unknown
25.0
2115
Male, age 80, left hemisphere
22.6
1968
Male, age 76, left hemisphere
21.1
2787
Female, age 85, both hemispheres
20.2
2727
Male, age 61, right hemisphere
19.5
Pontine raphe nucleus nTPM: 22.4
2853
Male, age 76, midline
23.4
2122
Female, age 85, midline
21.4
Posteroventral cochlear nucleus nTPM: 27.2
2135
Female, age 91, both hemispheres
43.2
2341
Male, age 80, both hemispheres
32.1
2752
Female, age 85, both hemispheres
24.5
2070
Male, age 76, both hemispheres
22.3
2371
Male, age 61, both hemispheres
13.9
Principal sensory trigeminal nucleus nTPM: 21.5
2367
Female, age 91, left hemisphere
31.9
2324
Male, age 76, both hemispheres
20.9
2008
Male, age 80, left hemisphere
16.8
2158
Male, age 61, both hemispheres
16.5
Reticular pontine nucleus, caudal nTPM: 23.2
2559
Male, age 74, both hemispheres
29.8
2092
Male, age 76, both hemispheres
26.8
2457
Female, age 91, both hemispheres
21.5
2332
Male, age 80, right hemisphere
14.6
Reticular pontine nucleus, oral nTPM: 31.6
2361
Male, age 74, both hemispheres
52.5
2366
Female, age 91, both hemispheres
32.6
2167
Male, age 76, both hemispheres
29.7
1939
Male, age 80, both hemispheres
24.1
2012
Female, age 85, both hemispheres
19.1
Reticulotegmental nucleus nTPM: 25.4
2452
Male, age 74, both hemispheres
35.2
2322
Female, age 91, both hemispheres
24.1
2325
Male, age 76, both hemispheres
21.8
2333
Male, age 80, both hemispheres
20.5
Spinal trigeminal nucleus, oral nTPM: 25.6
1978
Male, age 76, both hemispheres
27.5
2164
Male, age 80, both hemispheres
25.2
2737
Female, age 85, both hemispheres
24.1
Subcoeruleus area nTPM: 24.7
2451
Male, age 74, both hemispheres
33.7
2369
Female, age 85, left hemisphere
25.6
2323
Female, age 91, left hemisphere
23.1
1958
Male, age 80, both hemispheres
21.2
2089
Male, age 76, left hemisphere
19.8
Superior olive nTPM: 30.8
2364
Male, age 74, right hemisphere
70.0
2561
Female, age 91, both hemispheres
23.2
2020
Male, age 76, both hemispheres
22.4
2329
Male, age 80, right hemisphere
20.4
1875
Female, age 85, both hemispheres
17.8
Ventral periolivary nuclei nTPM: 21.2
2165
Male, age 80, both hemispheres
23.8
2794
Female, age 91, left hemisphere
21.5
2130
Female, age 85, both hemispheres
21.1
2023
Male, age 76, both hemispheres
18.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 25.9
2449
Male, age 74, both hemispheres
44.7
2359
Male, age 61, both hemispheres
27.2
2161
Male, age 80, both hemispheres
22.9
1959
Male, age 76, both hemispheres
21.2
2840
Female, age 85, both hemispheres
21.0
2456
Female, age 91, both hemispheres
18.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
