HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:686.8 nTPM
HPA Brain:292.6 nTPM
GTEx:686.8 nTPM
FANTOM5:33.2 Scaled Tags Per Million
Pig:824.8 nTPM
Mouse:440.6 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068418
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 292.6
Sample id Sample description nTPM
Hippocampus
nTPM: 286.8
2529 Female, age 94, left hemisphere 334.1
1898 Male, age 80, left hemisphere 329.4
2621 Female, age 67, right hemisphere 295.5
2148 Female, age 91, left hemisphere 266.4
1911 Female, age 85, right hemisphere 256.7
1855 Male, age 76, left hemisphere 238.7
Dentate gyrus
nTPM: 287.3
2530 Female, age 94, left hemisphere 364.4
2010 Male, age 76, both hemispheres 279.4
2246 Female, age 85, both hemispheres 277.3
2531 Female, age 67, both hemispheres 270.5
1927 Female, age 91, both hemispheres 267.1
2528 Male, age 74, both hemispheres 265.2
Entorhinal gyrus
nTPM: 284.8
2686 Male, age 75, right hemisphere 308.3
1938 Female, age 85, left hemisphere 296.0
2764 Male, age 80, right hemisphere 284.0
1787 Male, age 76, left hemisphere 279.8
2117 Female, age 91, right hemisphere 271.7
2613 Female, age 94, left hemisphere 269.3
Hippocampus, CA1
nTPM: 272.0
2749 Male, age 80, left hemisphere 318.2
1873 Female, age 85, both hemispheres 295.1
2082 Female, age 91, right hemisphere 262.5
2527 Male, age 74, both hemispheres 248.7
2045 Male, age 76, both hemispheres 235.2
Hippocampus, CA2
nTPM: 292.6
1892 Male, age 76, both hemispheres 353.5
1963 Male, age 80, left hemisphere 323.5
2437 Female, age 94, left hemisphere 288.0
1940 Female, age 85, left hemisphere 277.3
2113 Female, age 91, right hemisphere 261.5
2249 Male, age 74, both hemispheres 251.6
Hippocampus, CA3
nTPM: 284.4
1867 Male, age 76, both hemispheres 335.5
2861 Female, age 67, both hemispheres 315.1
2137 Male, age 80, left hemisphere 287.4
1891 Female, age 85, both hemispheres 273.6
2436 Male, age 74, both hemispheres 262.3
2620 Female, age 94, left hemisphere 232.7
Parahippocampal cortex
nTPM: 260.9
1850 Male, age 80, both hemispheres 304.8
2245 Female, age 91, both hemispheres 276.7
2250 Female, age 67, right hemisphere 273.8
2018 Male, age 76, both hemispheres 273.6
1933 Female, age 85, both hemispheres 270.2
1990 Female, age 91, right hemisphere 266.6
2692 Male, age 74, both hemispheres 261.5
2532 Female, age 72, left hemisphere 250.8
2622 Female, age 67, right hemisphere 220.6
2693 Female, age 94, both hemispheres 210.7
Perirhinal gyrus
nTPM: 286.1
1841 Female, age 85, right hemisphere 318.4
1847 Female, age 91, left hemisphere 316.7
1794 Male, age 80, right hemisphere 279.4
2848 Male, age 76, right hemisphere 269.5
2521 Female, age 94, right hemisphere 246.5
Subiculum
nTPM: 263.4
1977 Female, age 85, both hemispheres 297.5
2438 Female, age 94, left hemisphere 275.4
1901 Male, age 80, both hemispheres 274.1
2042 Male, age 76, both hemispheres 262.2
2729 Female, age 91, right hemisphere 237.2
2619 Male, age 74, both hemispheres 234.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 686.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 686.8
Samples: 197

Max nTPM: 1705.2
Min nTPM: 351.6
Std nTPM: 190.5
Median nTPM: 652.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1705.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1274.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1222.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1210.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1136.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1132.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1117.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1085.4
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 1048.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1031.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1017.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.2
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 824.8
Pig sample Sample description nTPM
Subiculum
nTPM: 764.6
Samples: 4

Max nTPM: 1028.0
Min nTPM: 629.5
Sample A Female 1028.0
Sample B Female 743.0
Sample C Male 629.5
Sample D Male 657.9
Dorsal hippocampus
nTPM: 824.8
Samples: 4

Max nTPM: 1008.1
Min nTPM: 619.5
Sample A Female 1008.1
Sample B Female 721.4
Sample C Male 950.3
Sample D Male 619.5
Entorhinal cortex
nTPM: 702.4
Samples: 4

Max nTPM: 851.3
Min nTPM: 534.6
Sample A Female 601.5
Sample B Female 851.3
Sample C Male 822.1
Sample D Male 534.6
Ventral hippocampus
nTPM: 706.7
Samples: 4

Max nTPM: 738.0
Min nTPM: 668.3
Sample A Female 710.6
Sample B Female 668.3
Sample C Male 709.9
Sample D Male 738.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 440.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 414.9
Samples: 4

Max nTPM: 435.6
Min nTPM: 402.6
Sample A Male 416.5
Sample B Male 404.8
Sample C Female 435.6
Sample D Female 402.6
Hippocampal formation
nTPM: 440.6
Samples: 4

Max nTPM: 502.0
Min nTPM: 410.5
Sample A Male 502.0
Sample B Male 420.9
Sample C Female 410.5
Sample D Female 428.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
69818317 Antisense, RP_050510_04_H04, Mouse strain C57BL/6J (56 days, male) 19.4

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