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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
368.9
nTPM
FANTOM5:
54.8
Scaled Tags Per Million
Pig:
883.3
nTPM
Allen mouse:
14.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
368.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 346.1
2188
Female, age 91, both hemispheres
377.5
2090
Male, age 80, both hemispheres
364.3
2301
Female, age 85, both hemispheres
331.5
1984
Male, age 76, both hemispheres
310.9
Dorsal cochlear nucleus nTPM: 363.6
2802
Male, age 74, right hemisphere
439.8
2187
Female, age 91, both hemispheres
404.0
2378
Male, age 80, both hemispheres
355.8
2370
Male, age 61, both hemispheres
317.4
2058
Male, age 76, both hemispheres
300.7
Dorsal tegmental nucleus nTPM: 356.4
2326
Male, age 74, both hemispheres
379.3
2358
Male, age 61, both hemispheres
376.6
2083
Male, age 80, both hemispheres
371.8
1936
Male, age 76, left hemisphere
297.9
Dorsolateral tegmental area nTPM: 368.8
2337
Male, age 61, both hemispheres
439.6
2654
Male, age 80, both hemispheres
395.6
2751
Female, age 85, both hemispheres
377.9
2360
Male, age 74, both hemispheres
326.2
2141
Male, age 76, both hemispheres
304.7
Kolliker-Fuse nucleus nTPM: 345.0
2163
Male, age 80, both hemispheres
356.0
2793
Female, age 91, left hemisphere
351.1
2315
Male, age 76, right hemisphere
328.0
Lateral lemniscal nuclei nTPM: 321.1
2169
Male, age 76, both hemispheres
394.5
2453
Male, age 74, right hemisphere
328.5
2746
Female, age 85, left hemisphere
324.3
2320
Female, age 91, left hemisphere
295.6
2036
Male, age 80, both hemispheres
262.5
Lateral parabrachial nucleus nTPM: 353.7
2013
Male, age 80, both hemispheres
373.7
2792
Male, age 76, both hemispheres
360.0
2139
Female, age 85, right hemisphere
355.9
2790
Male, age 61, both hemispheres
325.1
Lateral vestibular nucleus nTPM: 355.8
2311
Male, age 80, both hemispheres
388.4
2184
Male, age 76, both hemispheres
323.3
Locus coeruleus nTPM: 338.1
2014
Male, age 55, unknown
377.0
2123
Female, age 91, both hemispheres
360.3
2788
Male, age 74, unknown
343.4
2720
Male, age 74, both hemispheres
340.1
2317
Female, age 72, unknown
334.4
2162
Male, age 80, both hemispheres
330.1
1980
Male, age 76, both hemispheres
281.2
Medial parabrachial nucleus nTPM: 358.2
2170
Female, age 91, both hemispheres
447.6
2854
Male, age 80, both hemispheres
362.9
2463
Female, age 85, right hemisphere
350.8
2786
Male, age 76, both hemispheres
319.8
2156
Male, age 61, both hemispheres
310.1
Medial periolivary nuclei nTPM: 333.1
2063
Male, age 76, both hemispheres
409.0
2081
Male, age 80, both hemispheres
333.9
2171
Female, age 85, both hemispheres
317.0
2458
Female, age 91, both hemispheres
304.7
2791
Male, age 74, right hemisphere
300.8
Motor facial nucleus nTPM: 329.0
2062
Male, age 76, both hemispheres
408.4
2795
Female, age 91, both hemispheres
356.3
2365
Male, age 74, right hemisphere
348.7
2126
Male, age 61, both hemispheres
313.4
2697
Female, age 85, both hemispheres
311.3
2327
Male, age 80, both hemispheres
235.8
Motor trigeminal nucleus nTPM: 318.7
2309
Male, age 76, both hemispheres
336.1
2321
Female, age 91, both hemispheres
328.9
2560
Male, age 74, both hemispheres
321.9
2335
Male, age 61, both hemispheres
311.6
2079
Male, age 80, both hemispheres
295.1
Nuclei of the trapezoid body nTPM: 348.3
1983
Male, age 76, both hemispheres
472.0
2368
Female, age 91, both hemispheres
331.5
2159
Male, age 61, both hemispheres
326.0
2735
Female, age 85, both hemispheres
313.1
2166
Male, age 80, both hemispheres
298.8
Nucleus raphe magnus nTPM: 323.1
2051
Male, age 76, both hemispheres
365.5
2455
Male, age 74, both hemispheres
341.1
2172
Female, age 85, both hemispheres
329.6
2160
Male, age 61, both hemispheres
327.1
2459
Female, age 91, both hemispheres
291.0
2328
Male, age 80, both hemispheres
284.2
Paramedian reticular nucleus nTPM: 336.1
2052
Male, age 76, both hemispheres
359.6
2050
Female, age 85, both hemispheres
336.5
2313
Male, age 61, both hemispheres
324.3
2057
Male, age 80, both hemispheres
324.0
Pedunculopontine tegmental nucleus nTPM: 357.1
2338
Male, age 61, both hemispheres
408.4
2334
Male, age 80, both hemispheres
369.5
1921
Female, age 85, both hemispheres
293.4
Pontine nuclei nTPM: 345.5
1968
Male, age 76, left hemisphere
398.8
1863
Male, age 55, unknown
386.3
2787
Female, age 85, both hemispheres
356.8
2319
Female, age 91, both hemispheres
354.0
2109
Female, age 72, unknown
328.5
2727
Male, age 61, right hemisphere
321.0
2454
Male, age 74, left hemisphere
309.6
2115
Male, age 80, left hemisphere
308.6
Pontine raphe nucleus nTPM: 331.1
2122
Female, age 85, midline
337.1
2853
Male, age 76, midline
325.2
Posteroventral cochlear nucleus nTPM: 368.9
2341
Male, age 80, both hemispheres
426.8
2135
Female, age 91, both hemispheres
391.1
2371
Male, age 61, both hemispheres
364.2
2752
Female, age 85, both hemispheres
341.9
2070
Male, age 76, both hemispheres
320.3
Principal sensory trigeminal nucleus nTPM: 305.4
2324
Male, age 76, both hemispheres
320.3
2367
Female, age 91, left hemisphere
315.9
2158
Male, age 61, both hemispheres
305.5
2008
Male, age 80, left hemisphere
280.0
Reticular pontine nucleus, caudal nTPM: 331.3
2092
Male, age 76, both hemispheres
381.6
2559
Male, age 74, both hemispheres
353.2
2457
Female, age 91, both hemispheres
340.9
2332
Male, age 80, right hemisphere
249.4
Reticular pontine nucleus, oral nTPM: 347.0
1939
Male, age 80, both hemispheres
362.5
2167
Male, age 76, both hemispheres
361.9
2361
Male, age 74, both hemispheres
347.2
2366
Female, age 91, both hemispheres
343.6
2012
Female, age 85, both hemispheres
319.9
Reticulotegmental nucleus nTPM: 347.2
2452
Male, age 74, both hemispheres
385.1
2325
Male, age 76, both hemispheres
349.0
2322
Female, age 91, both hemispheres
342.4
2333
Male, age 80, both hemispheres
312.2
Spinal trigeminal nucleus, oral nTPM: 312.4
2164
Male, age 80, both hemispheres
335.0
1978
Male, age 76, both hemispheres
303.8
2737
Female, age 85, both hemispheres
298.5
Subcoeruleus area nTPM: 349.5
2451
Male, age 74, both hemispheres
403.4
2369
Female, age 85, left hemisphere
365.1
1958
Male, age 80, both hemispheres
339.2
2323
Female, age 91, left hemisphere
324.2
2089
Male, age 76, left hemisphere
315.8
Superior olive nTPM: 327.2
2020
Male, age 76, both hemispheres
390.4
2364
Male, age 74, right hemisphere
343.7
1875
Female, age 85, both hemispheres
326.4
2561
Female, age 91, both hemispheres
304.5
2329
Male, age 80, right hemisphere
270.9
Ventral periolivary nuclei nTPM: 334.5
2023
Male, age 76, both hemispheres
401.6
2165
Male, age 80, both hemispheres
318.3
2794
Female, age 91, left hemisphere
311.6
2130
Female, age 85, both hemispheres
306.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 331.0
1959
Male, age 76, both hemispheres
370.9
2840
Female, age 85, both hemispheres
340.2
2161
Male, age 80, both hemispheres
335.0
2359
Male, age 61, both hemispheres
330.7
2449
Male, age 74, both hemispheres
316.7
2456
Female, age 91, both hemispheres
292.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
883.3
Pig sample
Sample description
nTPM
Pons nTPM: 883.3
Samples: 4
Max nTPM: 1037.8
Min nTPM: 703.0
Sample A
Female
882.9
Sample B
Female
703.0
Sample C
Male
1037.8
Sample D
Male
909.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
