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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
613.4
nTPM
FANTOM5:
2027.3
Scaled Tags Per Million
Pig:
802.0
nTPM
Allen mouse:
14.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
613.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 188.4
1984
Male, age 76, both hemispheres
246.3
2188
Female, age 91, both hemispheres
195.0
2301
Female, age 85, both hemispheres
193.9
2090
Male, age 80, both hemispheres
118.3
Dorsal cochlear nucleus nTPM: 158.4
2187
Female, age 91, both hemispheres
237.7
2058
Male, age 76, both hemispheres
180.6
2370
Male, age 61, both hemispheres
158.9
2802
Male, age 74, right hemisphere
117.1
2378
Male, age 80, both hemispheres
97.8
Dorsal tegmental nucleus nTPM: 187.1
2083
Male, age 80, both hemispheres
235.4
1936
Male, age 76, left hemisphere
199.4
2358
Male, age 61, both hemispheres
173.7
2326
Male, age 74, both hemispheres
139.7
Dorsolateral tegmental area nTPM: 183.5
2141
Male, age 76, both hemispheres
250.9
2751
Female, age 85, both hemispheres
234.2
2654
Male, age 80, both hemispheres
225.4
2360
Male, age 74, both hemispheres
137.8
2337
Male, age 61, both hemispheres
69.2
Kolliker-Fuse nucleus nTPM: 304.7
2163
Male, age 80, both hemispheres
536.4
2793
Female, age 91, left hemisphere
218.1
2315
Male, age 76, right hemisphere
159.4
Lateral lemniscal nuclei nTPM: 340.8
2169
Male, age 76, both hemispheres
490.5
2453
Male, age 74, right hemisphere
417.1
2036
Male, age 80, both hemispheres
326.2
2746
Female, age 85, left hemisphere
265.1
2320
Female, age 91, left hemisphere
204.9
Lateral parabrachial nucleus nTPM: 220.1
2139
Female, age 85, right hemisphere
342.0
2790
Male, age 61, both hemispheres
235.3
2013
Male, age 80, both hemispheres
210.3
2792
Male, age 76, both hemispheres
92.8
Lateral vestibular nucleus nTPM: 337.8
2184
Male, age 76, both hemispheres
516.1
2311
Male, age 80, both hemispheres
159.5
Locus coeruleus nTPM: 613.4
2720
Male, age 74, both hemispheres
1034.6
2123
Female, age 91, both hemispheres
869.8
2788
Male, age 74, unknown
527.4
2014
Male, age 55, unknown
519.3
1980
Male, age 76, both hemispheres
501.1
2162
Male, age 80, both hemispheres
423.8
2317
Female, age 72, unknown
418.1
Medial parabrachial nucleus nTPM: 248.2
2854
Male, age 80, both hemispheres
300.8
2156
Male, age 61, both hemispheres
297.0
2170
Female, age 91, both hemispheres
234.4
2786
Male, age 76, both hemispheres
216.2
2463
Female, age 85, right hemisphere
192.6
Medial periolivary nuclei nTPM: 326.7
2063
Male, age 76, both hemispheres
499.7
2171
Female, age 85, both hemispheres
461.2
2791
Male, age 74, right hemisphere
290.0
2458
Female, age 91, both hemispheres
214.8
2081
Male, age 80, both hemispheres
167.6
Motor facial nucleus nTPM: 346.0
2062
Male, age 76, both hemispheres
523.7
2365
Male, age 74, right hemisphere
389.9
2327
Male, age 80, both hemispheres
378.6
2697
Female, age 85, both hemispheres
330.6
2126
Male, age 61, both hemispheres
255.0
2795
Female, age 91, both hemispheres
198.5
Motor trigeminal nucleus nTPM: 238.3
2079
Male, age 80, both hemispheres
300.2
2560
Male, age 74, both hemispheres
229.7
2309
Male, age 76, both hemispheres
229.6
2335
Male, age 61, both hemispheres
228.2
2321
Female, age 91, both hemispheres
203.7
Nuclei of the trapezoid body nTPM: 416.0
2159
Male, age 61, both hemispheres
687.8
1983
Male, age 76, both hemispheres
477.9
2735
Female, age 85, both hemispheres
424.9
2166
Male, age 80, both hemispheres
287.3
2368
Female, age 91, both hemispheres
202.4
Nucleus raphe magnus nTPM: 464.6
2160
Male, age 61, both hemispheres
758.8
2455
Male, age 74, both hemispheres
585.2
2172
Female, age 85, both hemispheres
538.6
2051
Male, age 76, both hemispheres
328.0
2328
Male, age 80, both hemispheres
327.5
2459
Female, age 91, both hemispheres
249.3
Paramedian reticular nucleus nTPM: 417.8
2313
Male, age 61, both hemispheres
555.3
2050
Female, age 85, both hemispheres
458.5
2057
Male, age 80, both hemispheres
405.1
2052
Male, age 76, both hemispheres
252.2
Pedunculopontine tegmental nucleus nTPM: 275.6
2334
Male, age 80, both hemispheres
316.1
1921
Female, age 85, both hemispheres
296.6
2338
Male, age 61, both hemispheres
214.1
Pontine nuclei nTPM: 358.1
2727
Male, age 61, right hemisphere
655.3
1863
Male, age 55, unknown
431.2
2787
Female, age 85, both hemispheres
413.4
1968
Male, age 76, left hemisphere
387.6
2109
Female, age 72, unknown
363.6
2454
Male, age 74, left hemisphere
285.9
2115
Male, age 80, left hemisphere
184.5
2319
Female, age 91, both hemispheres
143.0
Pontine raphe nucleus nTPM: 372.1
2122
Female, age 85, midline
428.8
2853
Male, age 76, midline
315.5
Posteroventral cochlear nucleus nTPM: 161.0
2752
Female, age 85, both hemispheres
336.9
2070
Male, age 76, both hemispheres
243.1
2371
Male, age 61, both hemispheres
131.9
2341
Male, age 80, both hemispheres
83.8
2135
Female, age 91, both hemispheres
9.5
Principal sensory trigeminal nucleus nTPM: 385.8
2158
Male, age 61, both hemispheres
571.1
2324
Male, age 76, both hemispheres
416.5
2008
Male, age 80, left hemisphere
364.5
2367
Female, age 91, left hemisphere
191.2
Reticular pontine nucleus, caudal nTPM: 274.4
2332
Male, age 80, right hemisphere
363.6
2092
Male, age 76, both hemispheres
348.3
2457
Female, age 91, both hemispheres
229.7
2559
Male, age 74, both hemispheres
156.1
Reticular pontine nucleus, oral nTPM: 283.5
2361
Male, age 74, both hemispheres
373.3
2012
Female, age 85, both hemispheres
357.1
1939
Male, age 80, both hemispheres
259.2
2167
Male, age 76, both hemispheres
240.2
2366
Female, age 91, both hemispheres
187.5
Reticulotegmental nucleus nTPM: 290.1
2325
Male, age 76, both hemispheres
411.3
2322
Female, age 91, both hemispheres
291.0
2333
Male, age 80, both hemispheres
242.4
2452
Male, age 74, both hemispheres
215.6
Spinal trigeminal nucleus, oral nTPM: 330.4
2737
Female, age 85, both hemispheres
407.5
2164
Male, age 80, both hemispheres
400.5
1978
Male, age 76, both hemispheres
183.3
Subcoeruleus area nTPM: 281.4
2323
Female, age 91, left hemisphere
408.7
1958
Male, age 80, both hemispheres
339.7
2089
Male, age 76, left hemisphere
303.5
2451
Male, age 74, both hemispheres
200.3
2369
Female, age 85, left hemisphere
154.8
Superior olive nTPM: 317.3
1875
Female, age 85, both hemispheres
433.2
2364
Male, age 74, right hemisphere
327.0
2020
Male, age 76, both hemispheres
319.5
2329
Male, age 80, right hemisphere
279.6
2561
Female, age 91, both hemispheres
227.2
Ventral periolivary nuclei nTPM: 371.6
2130
Female, age 85, both hemispheres
448.6
2165
Male, age 80, both hemispheres
439.4
2023
Male, age 76, both hemispheres
302.5
2794
Female, age 91, left hemisphere
296.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 312.2
2449
Male, age 74, both hemispheres
487.5
2840
Female, age 85, both hemispheres
355.5
1959
Male, age 76, both hemispheres
347.1
2359
Male, age 61, both hemispheres
299.3
2161
Male, age 80, both hemispheres
261.3
2456
Female, age 91, both hemispheres
122.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
802.0
Pig sample
Sample description
nTPM
Pons nTPM: 802.0
Samples: 4
Max nTPM: 869.4
Min nTPM: 671.0
Sample A
Female
811.3
Sample B
Female
671.0
Sample C
Male
869.4
Sample D
Male
856.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
