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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
84.3
nTPM
GTEx:
84.3
nTPM
FANTOM5:
67.8
Scaled Tags Per Million
Pig:
138.1
nTPM
Mouse:
107.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
84.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 84.3
Samples: 105
Max nTPM: 191.3
Min nTPM: 24.6
Std nTPM: 27.4
Median nTPM:
413_1
59 years, female
191.3
396_1
62 years, male
158.0
120_1
70 years, female
154.5
142_1
61 years, female
137.7
119_1
70 years, female
128.4
324_1
76 years, male
125.6
139_1
64 years, female
123.6
81_1
67 years, male
122.8
501_1
88 years, male
120.8
149_1
88 years, male
120.6
316_1
62 years, male
117.3
506_1
65 years, male
116.8
43_1
64 years, female
111.8
491_1
89 years, female
111.7
237_1
82 years, male
110.4
115_1
83 years, male
109.7
41_1
94 years, female
108.2
173_1
67 years, male
108.2
288_1
66 years, female
107.7
452_1
88 years, female
105.5
313_1
79 years, female
104.4
321_1
62 years, female
102.1
4_1
88 years, female
101.7
490_1
67 years, female
101.3
377_1
82 years, female
100.5
172_1
72 years, female
99.9
348_1
84 years, male
99.9
447_1
81 years, male
99.7
404_1
82 years, female
98.6
99_1
64 years, male
95.6
229_1
69 years, female
95.0
375_1
74 years, female
94.9
145_1
84 years, male
94.6
347_1
72 years, male
94.5
109_1
81 years, female
94.2
35_1
74 years, female
92.7
153_1
70 years, female
92.4
254_1
77 years, female
92.1
177_1
74 years, male
92.0
386_1
76 years, male
90.1
9_1
66 years, female
88.7
162_1
79 years, female
88.1
6_1
73 years, female
87.7
42_1
85 years, male
87.5
379_1
60 years, male
86.8
350_1
84 years, female
86.5
89_1
63 years, male
85.9
17_1
71 years, male
85.7
291_1
76 years, male
85.5
355_1
70 years, female
84.7
468_1
89 years, male
84.2
415_1
77 years, female
83.6
18_1
88 years, male
83.1
243_1
75 years, male
82.7
2_1
77 years, female
82.4
286_1
68 years, female
82.3
295_1
61 years, female
82.0
320_1
89 years, female
80.5
466_1
57 years, female
79.9
265_1
87 years, male
79.4
117_1
61 years, male
78.5
425_1
59 years, female
77.9
314_1
67 years, male
77.8
353_1
82 years, female
77.8
32_1
67 years, male
77.2
264_1
73 years, female
75.5
335_1
73 years, female
75.5
414_1
84 years, female
75.4
126_1
63 years, male
74.7
163_1
78 years, male
74.5
405_1
91 years, male
74.1
480_1
63 years, male
74.1
322_1
76 years, male
73.8
352_1
62 years, male
71.8
518_1
75 years, female
71.8
251_1
78 years, male
70.7
246_1
77 years, male
70.2
315_1
62 years, female
69.4
318_1
68 years, male
69.1
311_1
78 years, male
68.0
292_1
71 years, male
67.7
266_1
85 years, male
66.4
384_1
83 years, male
63.2
293_1
68 years, female
62.9
376_1
75 years, female
62.0
517_1
88 years, male
60.5
499_1
55 years, female
60.1
356_1
87 years, female
59.8
189_1
76 years, male
57.4
526_1
61 years, male
54.8
319_1
81 years, male
53.1
217_1
76 years, male
52.8
317_1
60 years, male
51.2
354_1
81 years, female
50.4
406_1
79 years, male
50.3
503_1
68 years, male
48.1
349_1
83 years, male
47.0
351_1
91 years, male
44.9
394_1
75 years, female
42.3
137_1
83 years, male
40.9
218_1
71 years, female
40.9
307_1
66 years, female
38.1
495_1
57 years, female
32.7
308_1
70 years, female
25.6
389_1
86 years, female
24.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
