HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.8 nTPM
HPA Brain:161.2 nTPM
GTEx:46.8 nTPM
FANTOM5:66.2 Scaled Tags Per Million
Pig:187.0 nTPM
Mouse:474.6 nTPM
Allen mouse:20.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043245
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 161.2
Sample id Sample description nTPM
Hippocampus
nTPM: 79.3
1898 Male, age 80, left hemisphere 158.7
2621 Female, age 67, right hemisphere 94.8
1911 Female, age 85, right hemisphere 63.4
1855 Male, age 76, left hemisphere 60.7
2148 Female, age 91, left hemisphere 56.5
2529 Female, age 94, left hemisphere 41.5
Dentate gyrus
nTPM: 85.8
1927 Female, age 91, both hemispheres 180.9
2010 Male, age 76, both hemispheres 93.1
2530 Female, age 94, left hemisphere 84.0
2246 Female, age 85, both hemispheres 72.2
2528 Male, age 74, both hemispheres 42.4
2531 Female, age 67, both hemispheres 42.0
Entorhinal gyrus
nTPM: 125.4
1938 Female, age 85, left hemisphere 202.3
1787 Male, age 76, left hemisphere 146.6
2764 Male, age 80, right hemisphere 144.0
2613 Female, age 94, left hemisphere 134.6
2686 Male, age 75, right hemisphere 79.1
2117 Female, age 91, right hemisphere 45.6
Hippocampus, CA1
nTPM: 74.8
1873 Female, age 85, both hemispheres 147.5
2749 Male, age 80, left hemisphere 127.2
2045 Male, age 76, both hemispheres 40.2
2527 Male, age 74, both hemispheres 31.4
2082 Female, age 91, right hemisphere 27.5
Hippocampus, CA2
nTPM: 134.1
1892 Male, age 76, both hemispheres 302.3
1963 Male, age 80, left hemisphere 217.1
2437 Female, age 94, left hemisphere 115.8
1940 Female, age 85, left hemisphere 84.9
2249 Male, age 74, both hemispheres 43.3
2113 Female, age 91, right hemisphere 41.3
Hippocampus, CA3
nTPM: 75.7
1867 Male, age 76, both hemispheres 129.2
1891 Female, age 85, both hemispheres 114.8
2137 Male, age 80, left hemisphere 74.8
2861 Female, age 67, both hemispheres 69.6
2436 Male, age 74, both hemispheres 39.9
2620 Female, age 94, left hemisphere 25.6
Parahippocampal cortex
nTPM: 114.6
1990 Female, age 91, right hemisphere 185.0
1850 Male, age 80, both hemispheres 182.9
1933 Female, age 85, both hemispheres 115.7
2250 Female, age 67, right hemisphere 113.6
2532 Female, age 72, left hemisphere 111.4
2693 Female, age 94, both hemispheres 105.1
2622 Female, age 67, right hemisphere 97.3
2245 Female, age 91, both hemispheres 96.0
2692 Male, age 74, both hemispheres 81.8
2018 Male, age 76, both hemispheres 57.2
Perirhinal gyrus
nTPM: 161.2
1847 Female, age 91, left hemisphere 246.0
1841 Female, age 85, right hemisphere 167.0
1794 Male, age 80, right hemisphere 154.9
2521 Female, age 94, right hemisphere 127.7
2848 Male, age 76, right hemisphere 110.6
Subiculum
nTPM: 95.7
1977 Female, age 85, both hemispheres 154.2
1901 Male, age 80, both hemispheres 133.1
2438 Female, age 94, left hemisphere 113.6
2619 Male, age 74, both hemispheres 80.3
2042 Male, age 76, both hemispheres 62.8
2729 Female, age 91, right hemisphere 30.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.8
Samples: 197

Max nTPM: 190.1
Min nTPM: 5.5
Std nTPM: 37.8
Median nTPM: 32.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 190.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 180.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 163.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 158.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 157.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 155.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 154.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 137.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 136.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 136.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 134.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.2
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 45.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 187.0
Pig sample Sample description nTPM
Subiculum
nTPM: 187.0
Samples: 4

Max nTPM: 208.7
Min nTPM: 156.6
Sample A Female 205.7
Sample B Female 208.7
Sample C Male 156.6
Sample D Male 177.1
Dorsal hippocampus
nTPM: 124.5
Samples: 4

Max nTPM: 136.8
Min nTPM: 108.6
Sample A Female 136.8
Sample B Female 119.1
Sample C Male 108.6
Sample D Male 133.4
Entorhinal cortex
nTPM: 158.4
Samples: 4

Max nTPM: 186.5
Min nTPM: 132.7
Sample A Female 158.9
Sample B Female 155.3
Sample C Male 186.5
Sample D Male 132.7
Ventral hippocampus
nTPM: 99.3
Samples: 4

Max nTPM: 122.4
Min nTPM: 64.5
Sample A Female 102.5
Sample B Female 107.9
Sample C Male 122.4
Sample D Male 64.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 474.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 474.6
Samples: 4

Max nTPM: 539.7
Min nTPM: 431.5
Sample A Male 444.7
Sample B Male 482.5
Sample C Female 431.5
Sample D Female 539.7
Hippocampal formation
nTPM: 362.7
Samples: 4

Max nTPM: 435.5
Min nTPM: 316.8
Sample A Male 435.5
Sample B Male 332.6
Sample C Female 365.9
Sample D Female 316.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.4
70437798 Antisense, RP_050614_02_H09, Mouse strain C57BL/6J (56 days, male) 20.4
71924321 Antisense, RP_050614_02_H09, Mouse strain C57BL/6J (56 days, male) 16.8

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