HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:199.1 nTPM
HPA Brain:161.9 nTPM
GTEx:199.1 nTPM
FANTOM5:171.8 Scaled Tags Per Million
Pig:92.1 nTPM
Mouse:6.7 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 161.9
Sample id Sample description nTPM
Hippocampus
nTPM: 161.9
2529 Female, age 94, left hemisphere 181.4
2148 Female, age 91, left hemisphere 169.6
2621 Female, age 67, right hemisphere 163.3
1911 Female, age 85, right hemisphere 156.0
1898 Male, age 80, left hemisphere 153.8
1855 Male, age 76, left hemisphere 147.5
Dentate gyrus
nTPM: 148.3
2530 Female, age 94, left hemisphere 184.9
1927 Female, age 91, both hemispheres 155.2
2531 Female, age 67, both hemispheres 155.1
2528 Male, age 74, both hemispheres 135.3
2010 Male, age 76, both hemispheres 131.6
2246 Female, age 85, both hemispheres 127.8
Entorhinal gyrus
nTPM: 141.8
2117 Female, age 91, right hemisphere 167.6
2613 Female, age 94, left hemisphere 143.8
2686 Male, age 75, right hemisphere 138.6
2764 Male, age 80, right hemisphere 137.4
1787 Male, age 76, left hemisphere 135.7
1938 Female, age 85, left hemisphere 127.5
Hippocampus, CA1
nTPM: 142.2
2082 Female, age 91, right hemisphere 152.0
2749 Male, age 80, left hemisphere 149.1
2527 Male, age 74, both hemispheres 142.4
1873 Female, age 85, both hemispheres 135.5
2045 Male, age 76, both hemispheres 132.3
Hippocampus, CA2
nTPM: 145.0
1963 Male, age 80, left hemisphere 158.9
2437 Female, age 94, left hemisphere 155.0
2113 Female, age 91, right hemisphere 150.7
1940 Female, age 85, left hemisphere 148.5
1892 Male, age 76, both hemispheres 133.5
2249 Male, age 74, both hemispheres 123.3
Hippocampus, CA3
nTPM: 149.9
2861 Female, age 67, both hemispheres 192.6
2620 Female, age 94, left hemisphere 162.2
1867 Male, age 76, both hemispheres 144.4
1891 Female, age 85, both hemispheres 144.0
2137 Male, age 80, left hemisphere 137.3
2436 Male, age 74, both hemispheres 119.1
Parahippocampal cortex
nTPM: 135.4
2245 Female, age 91, both hemispheres 165.2
2622 Female, age 67, right hemisphere 143.3
2692 Male, age 74, both hemispheres 143.0
2532 Female, age 72, left hemisphere 138.3
2250 Female, age 67, right hemisphere 138.2
2018 Male, age 76, both hemispheres 138.1
1990 Female, age 91, right hemisphere 131.0
1850 Male, age 80, both hemispheres 123.1
2693 Female, age 94, both hemispheres 120.8
1933 Female, age 85, both hemispheres 113.1
Perirhinal gyrus
nTPM: 127.1
1794 Male, age 80, right hemisphere 137.3
2521 Female, age 94, right hemisphere 130.7
1847 Female, age 91, left hemisphere 128.9
2848 Male, age 76, right hemisphere 121.8
1841 Female, age 85, right hemisphere 117.1
Subiculum
nTPM: 149.7
2438 Female, age 94, left hemisphere 171.6
2619 Male, age 74, both hemispheres 150.3
2729 Female, age 91, right hemisphere 148.7
1901 Male, age 80, both hemispheres 147.9
2042 Male, age 76, both hemispheres 140.6
1977 Female, age 85, both hemispheres 139.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 199.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 199.1
Samples: 197

Max nTPM: 316.6
Min nTPM: 68.3
Std nTPM: 41.8
Median nTPM: 194.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 316.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 307.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 307.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 306.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 305.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 302.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 290.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 284.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 282.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 279.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 276.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 171.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 171.8
FF:10153-102I9 76 years, female 203.5
FF:10169-103B7 60 years, female 140.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.1
Pig sample Sample description nTPM
Subiculum
nTPM: 79.2
Samples: 4

Max nTPM: 101.5
Min nTPM: 69.9
Sample A Female 101.5
Sample B Female 73.1
Sample C Male 69.9
Sample D Male 72.4
Dorsal hippocampus
nTPM: 90.1
Samples: 4

Max nTPM: 108.2
Min nTPM: 66.3
Sample A Female 108.2
Sample B Female 79.5
Sample C Male 106.2
Sample D Male 66.3
Entorhinal cortex
nTPM: 92.1
Samples: 4

Max nTPM: 99.6
Min nTPM: 81.3
Sample A Female 88.4
Sample B Female 99.6
Sample C Male 99.1
Sample D Male 81.3
Ventral hippocampus
nTPM: 83.5
Samples: 4

Max nTPM: 103.7
Min nTPM: 64.7
Sample A Female 80.2
Sample B Female 64.7
Sample C Male 103.7
Sample D Male 85.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 9.0
Min nTPM: 1.9
Sample A Male 6.3
Sample B Male 9.0
Sample C Female 1.9
Sample D Female 3.7
Hippocampal formation
nTPM: 6.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 3.4
Sample A Male 7.3
Sample B Male 4.9
Sample C Female 3.4
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
79544866 Antisense, RP_071101_01_A12, Mouse strain C57BL/6J (56 days, male) 6.9

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