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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
87.6
nTPM
GTEx:
87.6
nTPM
FANTOM5:
115.8
Scaled Tags Per Million
Pig:
72.2
nTPM
Mouse:
9.3
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
87.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 87.6
Samples: 105
Max nTPM: 184.9
Min nTPM: 20.1
Std nTPM: 33.1
Median nTPM: 0.0
218_1
71 years, female
184.9
237_1
82 years, male
168.2
379_1
60 years, male
146.4
452_1
88 years, female
142.4
394_1
75 years, female
136.6
243_1
75 years, male
133.9
506_1
65 years, male
131.7
354_1
81 years, female
131.0
177_1
74 years, male
130.8
349_1
83 years, male
130.6
173_1
67 years, male
129.3
375_1
74 years, female
126.8
350_1
84 years, female
125.7
163_1
78 years, male
124.5
352_1
62 years, male
124.1
319_1
81 years, male
122.0
264_1
73 years, female
120.4
351_1
91 years, male
120.3
335_1
73 years, female
119.0
172_1
72 years, female
118.9
447_1
81 years, male
118.0
406_1
79 years, male
117.9
425_1
59 years, female
117.3
386_1
76 years, male
116.7
376_1
75 years, female
116.5
384_1
83 years, male
115.6
292_1
71 years, male
112.7
295_1
61 years, female
112.2
356_1
87 years, female
111.4
189_1
76 years, male
111.1
377_1
82 years, female
110.0
347_1
72 years, male
108.7
355_1
70 years, female
107.7
480_1
63 years, male
107.7
321_1
62 years, female
106.5
293_1
68 years, female
104.8
317_1
60 years, male
103.2
320_1
89 years, female
102.5
286_1
68 years, female
101.8
353_1
82 years, female
100.3
318_1
68 years, male
99.6
229_1
69 years, female
99.1
526_1
61 years, male
98.9
389_1
86 years, female
97.0
404_1
82 years, female
95.7
307_1
66 years, female
93.9
405_1
91 years, male
93.5
246_1
77 years, male
92.7
316_1
62 years, male
91.5
291_1
76 years, male
91.2
254_1
77 years, female
89.4
322_1
76 years, male
89.4
251_1
78 years, male
88.6
265_1
87 years, male
87.9
503_1
68 years, male
87.1
41_1
94 years, female
87.0
348_1
84 years, male
86.1
266_1
85 years, male
81.8
313_1
79 years, female
81.4
396_1
62 years, male
80.7
311_1
78 years, male
80.2
517_1
88 years, male
79.6
99_1
64 years, male
78.7
314_1
67 years, male
77.7
35_1
74 years, female
76.8
288_1
66 years, female
75.5
137_1
83 years, male
73.2
499_1
55 years, female
72.0
324_1
76 years, male
70.8
468_1
89 years, male
70.8
6_1
73 years, female
70.7
217_1
76 years, male
68.4
17_1
71 years, male
66.4
42_1
85 years, male
64.6
518_1
75 years, female
64.5
2_1
77 years, female
64.0
145_1
84 years, male
64.0
315_1
62 years, female
63.9
115_1
83 years, male
60.6
117_1
61 years, male
59.7
4_1
88 years, female
58.7
120_1
70 years, female
57.6
308_1
70 years, female
57.6
18_1
88 years, male
57.0
9_1
66 years, female
55.9
153_1
70 years, female
55.9
109_1
81 years, female
53.0
126_1
63 years, male
52.3
415_1
77 years, female
51.9
501_1
88 years, male
51.9
495_1
57 years, female
51.8
81_1
67 years, male
51.2
32_1
67 years, male
46.8
466_1
57 years, female
44.7
142_1
61 years, female
41.6
119_1
70 years, female
40.5
162_1
79 years, female
38.9
43_1
64 years, female
38.4
139_1
64 years, female
37.1
414_1
84 years, female
36.9
89_1
63 years, male
32.1
490_1
67 years, female
31.2
413_1
59 years, female
25.5
149_1
88 years, male
21.5
491_1
89 years, female
20.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
